Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Mpp5-201ENSMUST00000082024 5470 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col6a4A2AX52 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col6a4A2AX52 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col6a4A2AX52 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col6a4A2AX52 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col6a4A2AX52 AC115910.1-201ENSMUST00000221188 4275 ntBASIC4.64□□□□□ -1.67
Col6a4A2AX52 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col6a4A2AX52 Gm45635-201ENSMUST00000211516 2134 ntBASIC4.64□□□□□ -1.67
Col6a4A2AX52 Gm44043-201ENSMUST00000203426 3253 ntBASIC4.64□□□□□ -1.67
Col6a4A2AX52 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col6a4A2AX52 Gm38096-201ENSMUST00000193692 2389 ntBASIC4.64□□□□□ -1.67
Col6a4A2AX52 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Col6a4A2AX52 Gm12732-201ENSMUST00000121688 180 ntBASIC4.64□□□□□ -1.67
Col6a4A2AX52 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Col6a4A2AX52 Gm23327-201ENSMUST00000157420 78 ntBASIC4.64□□□□□ -1.67
Col6a4A2AX52 Gm37621-201ENSMUST00000194716 5531 ntBASIC4.64□□□□□ -1.67
Col6a4A2AX52 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Col6a4A2AX52 AC152979.3-201ENSMUST00000217720 479 ntBASIC4.64□□□□□ -1.67
Col6a4A2AX52 AC158803.2-201ENSMUST00000219452 679 ntBASIC4.64□□□□□ -1.67
Col6a4A2AX52 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Col6a4A2AX52 AC154840.1-201ENSMUST00000225216 408 ntBASIC4.64□□□□□ -1.67
Col6a4A2AX52 Olfr749-201ENSMUST00000074674 1016 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
Col6a4A2AX52 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Col6a4A2AX52 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col6a4A2AX52 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Col6a4A2AX52 AC144733.2-201ENSMUST00000222552 2292 ntBASIC4.64□□□□□ -1.67
Col6a4A2AX52 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Col6a4A2AX52 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Col6a4A2AX52 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col6a4A2AX52 Agbl2-208ENSMUST00000170320 4507 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col6a4A2AX52 AC124516.1-201ENSMUST00000221845 3544 ntBASIC4.64□□□□□ -1.67
Col6a4A2AX52 Ctage5-209ENSMUST00000175912 2885 ntTSL 5 BASIC4.64□□□□□ -1.67
Col6a4A2AX52 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC4.64□□□□□ -1.67
Col6a4A2AX52 AC158982.1-205ENSMUST00000227339 1876 ntBASIC4.64□□□□□ -1.67
Col6a4A2AX52 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC4.63□□□□□ -1.67
Col6a4A2AX52 Gm14563-201ENSMUST00000120571 354 ntBASIC4.63□□□□□ -1.67
Col6a4A2AX52 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Col6a4A2AX52 Gm37215-201ENSMUST00000194927 1259 ntBASIC4.63□□□□□ -1.67
Col6a4A2AX52 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Col6a4A2AX52 AC238676.3-201ENSMUST00000223042 154 ntBASIC4.63□□□□□ -1.67
Col6a4A2AX52 CT956049.1-201ENSMUST00000225671 763 ntBASIC4.63□□□□□ -1.67
Col6a4A2AX52 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col6a4A2AX52 Ctla4-202ENSMUST00000097720 614 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Col6a4A2AX52 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col6a4A2AX52 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Col6a4A2AX52 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Col6a4A2AX52 Gm43864-201ENSMUST00000204452 4028 ntBASIC4.63□□□□□ -1.67
Col6a4A2AX52 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col6a4A2AX52 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col6a4A2AX52 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Col6a4A2AX52 A930017M01Rik-205ENSMUST00000227721 4167 ntBASIC4.63□□□□□ -1.67
Col6a4A2AX52 Gm15425-201ENSMUST00000119013 2711 ntBASIC4.63□□□□□ -1.67
Col6a4A2AX52 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Col6a4A2AX52 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Col6a4A2AX52 Skil-204ENSMUST00000118470 6578 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col6a4A2AX52 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Col6a4A2AX52 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC4.63□□□□□ -1.67
Col6a4A2AX52 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col6a4A2AX52 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col6a4A2AX52 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Col6a4A2AX52 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Col6a4A2AX52 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
Col6a4A2AX52 Gm11972-201ENSMUST00000118514 389 ntBASIC4.63□□□□□ -1.67
Col6a4A2AX52 Gm11245-201ENSMUST00000119419 1037 ntBASIC4.63□□□□□ -1.67
Col6a4A2AX52 Gm14620-201ENSMUST00000120656 383 ntBASIC4.63□□□□□ -1.67
Col6a4A2AX52 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC4.63□□□□□ -1.67
Col6a4A2AX52 Mir3104-201ENSMUST00000174911 63 ntBASIC4.63□□□□□ -1.67
Col6a4A2AX52 Gm37882-201ENSMUST00000195254 196 ntBASIC4.63□□□□□ -1.67
Col6a4A2AX52 Gm7887-201ENSMUST00000056948 537 ntBASIC4.63□□□□□ -1.67
Col6a4A2AX52 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Col6a4A2AX52 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col6a4A2AX52 AW554918-201ENSMUST00000036619 5257 ntAPPRIS P5 TSL 5 BASIC4.63□□□□□ -1.67
Col6a4A2AX52 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC4.63□□□□□ -1.67
Col6a4A2AX52 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col6a4A2AX52 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col6a4A2AX52 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Col6a4A2AX52 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
Col6a4A2AX52 Robo2-202ENSMUST00000117200 5988 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Col6a4A2AX52 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col6a4A2AX52 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col6a4A2AX52 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Col6a4A2AX52 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Col6a4A2AX52 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col6a4A2AX52 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Col6a4A2AX52 Gm37474-201ENSMUST00000194812 1814 ntBASIC4.62□□□□□ -1.67
Col6a4A2AX52 Cyp2c65-201ENSMUST00000087236 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col6a4A2AX52 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Col6a4A2AX52 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC4.62□□□□□ -1.67
Col6a4A2AX52 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC4.62□□□□□ -1.67
Col6a4A2AX52 Gm7973-201ENSMUST00000122107 488 ntBASIC4.62□□□□□ -1.67
Col6a4A2AX52 Gm23534-201ENSMUST00000157539 97 ntBASIC4.62□□□□□ -1.67
Col6a4A2AX52 Gm25865-201ENSMUST00000158247 104 ntBASIC4.62□□□□□ -1.67
Col6a4A2AX52 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC4.62□□□□□ -1.67
Col6a4A2AX52 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC4.62□□□□□ -1.67
Col6a4A2AX52 Gm45405-201ENSMUST00000211544 609 ntBASIC4.62□□□□□ -1.67
Col6a4A2AX52 AC153840.1-201ENSMUST00000219685 313 ntBASIC4.62□□□□□ -1.67
Col6a4A2AX52 AC154450.1-201ENSMUST00000220911 485 ntBASIC4.62□□□□□ -1.67
Col6a4A2AX52 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Col6a4A2AX52 Gm4822-201ENSMUST00000077551 479 ntBASIC4.62□□□□□ -1.67
Col6a4A2AX52 Rnase12-201ENSMUST00000089798 545 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms