Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 1700016L21Rik-202ENSMUST00000189139 629 ntTSL 3 BASIC6.59□□□□□ -1.35
Trim39Q9ESN2 Gm37501-201ENSMUST00000192830 691 ntBASIC6.59□□□□□ -1.35
Trim39Q9ESN2 Gm17965-201ENSMUST00000193904 517 ntBASIC6.59□□□□□ -1.35
Trim39Q9ESN2 Gm37341-201ENSMUST00000194680 371 ntBASIC6.59□□□□□ -1.35
Trim39Q9ESN2 Gm37585-201ENSMUST00000195440 280 ntBASIC6.59□□□□□ -1.35
Trim39Q9ESN2 Gm43370-201ENSMUST00000196437 284 ntBASIC6.59□□□□□ -1.35
Trim39Q9ESN2 C920008G01Rik-201ENSMUST00000196756 380 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Trim39Q9ESN2 Gm42932-201ENSMUST00000197280 744 ntBASIC6.59□□□□□ -1.35
Trim39Q9ESN2 Gm42999-201ENSMUST00000198049 786 ntBASIC6.59□□□□□ -1.35
Trim39Q9ESN2 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC6.59□□□□□ -1.35
Trim39Q9ESN2 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Trim39Q9ESN2 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Trim39Q9ESN2 Gm17991-201ENSMUST00000208139 297 ntBASIC6.59□□□□□ -1.35
Trim39Q9ESN2 Olfr936-202ENSMUST00000216912 937 ntBASIC6.59□□□□□ -1.35
Trim39Q9ESN2 Gm8058-201ENSMUST00000217247 587 ntBASIC6.59□□□□□ -1.35
Trim39Q9ESN2 AC153840.1-201ENSMUST00000219685 313 ntBASIC6.59□□□□□ -1.35
Trim39Q9ESN2 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC6.59□□□□□ -1.35
Trim39Q9ESN2 CT030184.2-201ENSMUST00000223064 263 ntBASIC6.59□□□□□ -1.35
Trim39Q9ESN2 AC154510.1-201ENSMUST00000223925 737 ntBASIC6.59□□□□□ -1.35
Trim39Q9ESN2 Gm12582-201ENSMUST00000030555 697 ntBASIC6.59□□□□□ -1.35
Trim39Q9ESN2 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Trim39Q9ESN2 Olfr1383-201ENSMUST00000077143 940 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Trim39Q9ESN2 Rpl31-ps20-201ENSMUST00000080982 378 ntBASIC6.59□□□□□ -1.35
Trim39Q9ESN2 Olfr224-201ENSMUST00000081102 945 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
Trim39Q9ESN2 Gm23614-201ENSMUST00000082598 107 ntBASIC6.59□□□□□ -1.35
Trim39Q9ESN2 Gm24144-201ENSMUST00000082632 111 ntBASIC6.59□□□□□ -1.35
Trim39Q9ESN2 Gm25512-201ENSMUST00000083863 107 ntBASIC6.59□□□□□ -1.35
Trim39Q9ESN2 Gm6866-201ENSMUST00000188559 2549 ntBASIC6.59□□□□□ -1.35
Trim39Q9ESN2 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Trim39Q9ESN2 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Trim39Q9ESN2 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Trim39Q9ESN2 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
Trim39Q9ESN2 Gm38120-201ENSMUST00000195506 4642 ntBASIC6.59□□□□□ -1.35
Trim39Q9ESN2 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC6.59□□□□□ -1.35
Trim39Q9ESN2 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.35
Trim39Q9ESN2 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Trim39Q9ESN2 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
Trim39Q9ESN2 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Trim39Q9ESN2 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.36
Trim39Q9ESN2 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
Trim39Q9ESN2 Trpm8-204ENSMUST00000171176 3723 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
Trim39Q9ESN2 Gm35028-201ENSMUST00000215400 2587 ntTSL 5 BASIC6.59□□□□□ -1.36
Trim39Q9ESN2 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.36
Trim39Q9ESN2 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Gm7269-201ENSMUST00000210819 1373 ntBASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Gm43842-201ENSMUST00000202890 2982 ntBASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Sgip1-203ENSMUST00000080728 3712 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Gm42728-201ENSMUST00000202644 1552 ntBASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Gm14245-201ENSMUST00000118939 1843 ntBASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Lipe-203ENSMUST00000105177 1251 ntBASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Gm14670-201ENSMUST00000117327 337 ntBASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Gm12710-201ENSMUST00000119011 216 ntBASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Gm14678-201ENSMUST00000121396 482 ntBASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Gm24893-201ENSMUST00000122745 369 ntBASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Gm5924-201ENSMUST00000132554 871 ntBASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Rps16-ps2-201ENSMUST00000140155 441 ntBASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Gm22948-201ENSMUST00000158561 243 ntBASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Gm22076-201ENSMUST00000158601 84 ntBASIC6.58□□□□□ -1.36
Trim39Q9ESN2 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Smarca2-210ENSMUST00000176475 983 ntTSL 5 BASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Gm21815-201ENSMUST00000178213 664 ntBASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Mir7115-201ENSMUST00000184275 64 ntBASIC6.58□□□□□ -1.36
Trim39Q9ESN2 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Gm43555-201ENSMUST00000196588 310 ntBASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Gm43856-201ENSMUST00000197004 369 ntBASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
Trim39Q9ESN2 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Gm8106-201ENSMUST00000213123 523 ntBASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Gm46146-201ENSMUST00000217483 346 ntBASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Gm5791-201ENSMUST00000220840 489 ntBASIC6.58□□□□□ -1.36
Trim39Q9ESN2 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC6.58□□□□□ -1.36
Trim39Q9ESN2 AC153662.1-201ENSMUST00000222220 270 ntBASIC6.58□□□□□ -1.36
Trim39Q9ESN2 AL591207.2-201ENSMUST00000222991 337 ntBASIC6.58□□□□□ -1.36
Trim39Q9ESN2 AC173481.1-201ENSMUST00000223351 270 ntBASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Olfr1322-201ENSMUST00000070304 933 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Gm22364-201ENSMUST00000083097 98 ntBASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Gm10794-201ENSMUST00000099624 207 ntBASIC6.58□□□□□ -1.36
Trim39Q9ESN2 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC6.58□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms