Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Pomk-201ENSMUST00000061850 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ube3bQ9ES34 Phc3-204ENSMUST00000108255 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ube3bQ9ES34 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Ube3bQ9ES34 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Ube3bQ9ES34 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC8.16□□□□□ -1.1
Ube3bQ9ES34 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Ube3bQ9ES34 Gm44022-201ENSMUST00000203708 5429 ntBASIC8.16□□□□□ -1.1
Ube3bQ9ES34 AC154461.6-201ENSMUST00000224815 2630 ntBASIC8.16□□□□□ -1.1
Ube3bQ9ES34 Vmn1r196-203ENSMUST00000227516 5122 ntBASIC8.16□□□□□ -1.1
Ube3bQ9ES34 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ube3bQ9ES34 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Gm43681-201ENSMUST00000201581 1903 ntBASIC8.15□□□□□ -1.1
Ube3bQ9ES34 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Mctp1-205ENSMUST00000126960 1780 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Akt3-201ENSMUST00000019843 1511 ntTSL 5 BASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Mir466n-201ENSMUST00000104798 94 ntBASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Gm13983-201ENSMUST00000118018 865 ntBASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Gm12135-201ENSMUST00000119170 466 ntBASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Gm12935-201ENSMUST00000119352 246 ntBASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Gm15266-201ENSMUST00000119635 255 ntBASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Gm4992-201ENSMUST00000120256 768 ntBASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Gm13593-201ENSMUST00000121329 692 ntBASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Gm13471-201ENSMUST00000122057 433 ntBASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Gm13963-201ENSMUST00000143525 892 ntTSL 3 BASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Gm25909-201ENSMUST00000157619 121 ntBASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Gm24853-201ENSMUST00000158026 121 ntBASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Gm5871-201ENSMUST00000176461 718 ntBASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Gm20615-201ENSMUST00000177503 705 ntBASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Gm27507-201ENSMUST00000184199 93 ntBASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Gm29281-201ENSMUST00000188077 381 ntBASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Gm9504-201ENSMUST00000196322 468 ntBASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Gm18805-201ENSMUST00000206872 655 ntBASIC8.15□□□□□ -1.1
Ube3bQ9ES34 AC134334.1-201ENSMUST00000214277 255 ntBASIC8.15□□□□□ -1.1
Ube3bQ9ES34 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Gm18704-201ENSMUST00000219736 446 ntBASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Gm40658-203ENSMUST00000222210 1070 ntTSL 5 BASIC8.15□□□□□ -1.1
Ube3bQ9ES34 AC124489.3-201ENSMUST00000224037 278 ntBASIC8.15□□□□□ -1.1
Ube3bQ9ES34 CT009711.2-201ENSMUST00000225352 934 ntBASIC8.15□□□□□ -1.1
Ube3bQ9ES34 AC154600.1-201ENSMUST00000226480 714 ntBASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Gm22053-201ENSMUST00000083394 200 ntBASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ube3bQ9ES34 A130010J15Rik-203ENSMUST00000160822 3793 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Ube3bQ9ES34 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Ube3bQ9ES34 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Ube3bQ9ES34 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
Ube3bQ9ES34 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC8.15□□□□□ -1.11
Ube3bQ9ES34 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.11
Ube3bQ9ES34 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
Ube3bQ9ES34 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.11
Ube3bQ9ES34 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC8.15□□□□□ -1.11
Ube3bQ9ES34 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Ube3bQ9ES34 Gm21152-201ENSMUST00000190271 3483 ntBASIC8.15□□□□□ -1.11
Ube3bQ9ES34 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC8.15□□□□□ -1.11
Ube3bQ9ES34 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ube3bQ9ES34 Gria3-202ENSMUST00000115103 3081 ntAPPRIS ALT1 TSL 5 BASIC8.14□□□□□ -1.11
Ube3bQ9ES34 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Ube3bQ9ES34 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ube3bQ9ES34 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ube3bQ9ES34 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Ube3bQ9ES34 Gm37096-201ENSMUST00000192317 2058 ntBASIC8.14□□□□□ -1.11
Ube3bQ9ES34 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ube3bQ9ES34 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ube3bQ9ES34 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ube3bQ9ES34 Gm22231-201ENSMUST00000101027 73 ntBASIC8.14□□□□□ -1.11
Ube3bQ9ES34 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Ube3bQ9ES34 Zfp389-201ENSMUST00000118425 675 ntBASIC8.14□□□□□ -1.11
Ube3bQ9ES34 Gm12447-201ENSMUST00000119110 470 ntBASIC8.14□□□□□ -1.11
Ube3bQ9ES34 M6pr-ps-201ENSMUST00000120481 830 ntBASIC8.14□□□□□ -1.11
Ube3bQ9ES34 Gm12358-201ENSMUST00000121842 520 ntBASIC8.14□□□□□ -1.11
Ube3bQ9ES34 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Ube3bQ9ES34 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC8.14□□□□□ -1.11
Ube3bQ9ES34 Ulbp1-201ENSMUST00000169796 1093 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Ube3bQ9ES34 Gm5456-201ENSMUST00000170706 844 ntBASIC8.14□□□□□ -1.11
Ube3bQ9ES34 Gm26426-201ENSMUST00000177866 123 ntBASIC8.14□□□□□ -1.11
Ube3bQ9ES34 Gm17045-201ENSMUST00000178600 844 ntBASIC8.14□□□□□ -1.11
Ube3bQ9ES34 Gm26060-201ENSMUST00000180094 123 ntBASIC8.14□□□□□ -1.11
Ube3bQ9ES34 Gm27804-201ENSMUST00000185135 119 ntBASIC8.14□□□□□ -1.11
Ube3bQ9ES34 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC8.14□□□□□ -1.11
Ube3bQ9ES34 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC8.14□□□□□ -1.11
Ube3bQ9ES34 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 116.8 ms