Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gm6446-201ENSMUST00000120604 818 ntBASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Gm12890-201ENSMUST00000120885 373 ntBASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Gm26106-201ENSMUST00000157254 228 ntBASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Gm19057-201ENSMUST00000194329 1197 ntBASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Gm2142-201ENSMUST00000197899 589 ntBASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Gm2602-201ENSMUST00000202112 571 ntBASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Klra14-ps-202ENSMUST00000203601 1104 ntTSL 5 BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Gm45701-201ENSMUST00000212049 235 ntBASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 CT485612.1-201ENSMUST00000222555 382 ntBASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Gm36262-201ENSMUST00000223274 499 ntBASIC5.56□□□□□ -1.52
Cstf3Q99LI7 AC133203.2-201ENSMUST00000226709 464 ntBASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Fap-208ENSMUST00000174234 2211 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Gm37773-201ENSMUST00000194141 2120 ntBASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Gm42645-201ENSMUST00000201573 1627 ntBASIC5.56□□□□□ -1.52
Cstf3Q99LI7 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC5.55□□□□□ -1.52
Cstf3Q99LI7 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Cstf3Q99LI7 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cstf3Q99LI7 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Cstf3Q99LI7 AC132852.2-201ENSMUST00000216052 2794 ntBASIC5.55□□□□□ -1.52
Cstf3Q99LI7 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cstf3Q99LI7 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Cstf3Q99LI7 Gm22371-201ENSMUST00000104588 130 ntBASIC5.55□□□□□ -1.52
Cstf3Q99LI7 Ube2v2-204ENSMUST00000118236 893 ntTSL 5 BASIC5.55□□□□□ -1.52
Cstf3Q99LI7 Gm14580-201ENSMUST00000119122 718 ntBASIC5.55□□□□□ -1.52
Cstf3Q99LI7 Gm15618-201ENSMUST00000121610 452 ntBASIC5.55□□□□□ -1.52
Cstf3Q99LI7 Mup-ps15-201ENSMUST00000121741 539 ntBASIC5.55□□□□□ -1.52
Cstf3Q99LI7 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC5.55□□□□□ -1.52
Cstf3Q99LI7 4930547E08Rik-201ENSMUST00000143559 541 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Cstf3Q99LI7 Gm26346-201ENSMUST00000157525 329 ntBASIC5.55□□□□□ -1.52
Cstf3Q99LI7 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Cstf3Q99LI7 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC5.55□□□□□ -1.52
Cstf3Q99LI7 Gm17048-201ENSMUST00000179266 847 ntBASIC5.55□□□□□ -1.52
Cstf3Q99LI7 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Cstf3Q99LI7 Gm4832-201ENSMUST00000182679 399 ntBASIC5.55□□□□□ -1.52
Cstf3Q99LI7 1700015G11Rik-202ENSMUST00000185758 366 ntAPPRIS ALT2 TSL 3 BASIC5.55□□□□□ -1.52
Cstf3Q99LI7 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Cstf3Q99LI7 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC5.55□□□□□ -1.52
Cstf3Q99LI7 4930590L20Rik-201ENSMUST00000193820 553 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Cstf3Q99LI7 Gm37375-201ENSMUST00000193859 387 ntBASIC5.55□□□□□ -1.52
Cstf3Q99LI7 Gm19030-201ENSMUST00000194947 552 ntBASIC5.55□□□□□ -1.52
Cstf3Q99LI7 Gm37385-201ENSMUST00000195223 387 ntBASIC5.55□□□□□ -1.52
Cstf3Q99LI7 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC5.55□□□□□ -1.52
Cstf3Q99LI7 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC5.55□□□□□ -1.52
Cstf3Q99LI7 Gm43295-201ENSMUST00000201439 412 ntBASIC5.55□□□□□ -1.52
Cstf3Q99LI7 Gm43798-201ENSMUST00000202056 394 ntBASIC5.55□□□□□ -1.52
Cstf3Q99LI7 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Cstf3Q99LI7 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Cstf3Q99LI7 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Cstf3Q99LI7 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC5.55□□□□□ -1.52
Cstf3Q99LI7 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC5.55□□□□□ -1.52
Cstf3Q99LI7 AV026068-216ENSMUST00000223874 328 ntBASIC5.55□□□□□ -1.52
Cstf3Q99LI7 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Cstf3Q99LI7 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms