Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Gm43857-201ENSMUST00000200343 3079 ntBASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Gm23739-201ENSMUST00000102295 108 ntBASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Gm25917-201ENSMUST00000104267 130 ntBASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Gm11105-201ENSMUST00000112781 478 ntBASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Gm23839-201ENSMUST00000116957 109 ntBASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Gm14876-201ENSMUST00000120795 327 ntBASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Gm12140-201ENSMUST00000121214 544 ntBASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Gm15022-201ENSMUST00000122074 746 ntBASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Gm21772-201ENSMUST00000169213 478 ntBASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Gm9597-201ENSMUST00000171913 602 ntBASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Gm17126-201ENSMUST00000172276 523 ntBASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Mir5125-201ENSMUST00000175240 79 ntBASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Gm20561-201ENSMUST00000188131 292 ntBASIC5.36□□□□□ -1.55
Lsm1Q8VC85 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Gm42452-201ENSMUST00000199749 617 ntBASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Gm6520-201ENSMUST00000200636 410 ntBASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Gm4083-201ENSMUST00000207158 451 ntBASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Gm18997-201ENSMUST00000216353 822 ntBASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Spata9-201ENSMUST00000022081 1057 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Lsm1Q8VC85 AC133203.1-201ENSMUST00000228241 301 ntBASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Vmn1r67-201ENSMUST00000055964 999 ntAPPRIS P2 BASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Gm6990-201ENSMUST00000086830 348 ntBASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Olfr536-201ENSMUST00000064392 3853 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
Lsm1Q8VC85 A530046M15Rik-201ENSMUST00000221778 1538 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Gm33336-201ENSMUST00000219656 1676 ntTSL 5 BASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Gm8980-201ENSMUST00000140232 2197 ntBASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Gm45555-201ENSMUST00000210028 2602 ntBASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Lsm1Q8VC85 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Lsm1Q8VC85 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Lsm1Q8VC85 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Fat2-201ENSMUST00000068853 14528 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Gm37221-201ENSMUST00000194472 3007 ntBASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Lsm1Q8VC85 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Gm42540-201ENSMUST00000200319 2008 ntBASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Gm2223-201ENSMUST00000112099 1350 ntBASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Gm22231-201ENSMUST00000101027 73 ntBASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Gm26300-201ENSMUST00000102282 94 ntBASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Gm11826-201ENSMUST00000118781 438 ntBASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Gm12110-201ENSMUST00000121601 579 ntBASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC5.35□□□□□ -1.55
Lsm1Q8VC85 2310044K18Rik-201ENSMUST00000125131 618 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Gm22223-201ENSMUST00000157360 125 ntBASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Gm2058-201ENSMUST00000178791 560 ntBASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Gm24949-201ENSMUST00000183609 215 ntBASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Gm8581-201ENSMUST00000188636 890 ntBASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Gm38122-201ENSMUST00000192679 885 ntBASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Gm37177-201ENSMUST00000193768 417 ntBASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Gm31861-201ENSMUST00000204563 672 ntBASIC5.35□□□□□ -1.55
Lsm1Q8VC85 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC5.35□□□□□ -1.55
Lsm1Q8VC85 AC126554.2-201ENSMUST00000223259 400 ntBASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Olfr275-201ENSMUST00000095085 960 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Rbm46os-201ENSMUST00000131274 3261 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC5.35□□□□□ -1.55
Lsm1Q8VC85 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 122.1 ms