Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm7413-201ENSMUST00000219498 462 ntBASIC5.88□□□□□ -1.47
Clrn1Q8K445 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Clrn1Q8K445 Gm18620-201ENSMUST00000222295 324 ntBASIC5.88□□□□□ -1.47
Clrn1Q8K445 Gm18940-201ENSMUST00000222518 871 ntBASIC5.88□□□□□ -1.47
Clrn1Q8K445 AC110380.1-201ENSMUST00000226987 389 ntBASIC5.88□□□□□ -1.47
Clrn1Q8K445 AC159979.1-201ENSMUST00000227927 342 ntBASIC5.88□□□□□ -1.47
Clrn1Q8K445 AC154618.2-201ENSMUST00000228299 452 ntBASIC5.88□□□□□ -1.47
Clrn1Q8K445 AC139197.1-201ENSMUST00000228332 813 ntBASIC5.88□□□□□ -1.47
Clrn1Q8K445 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Clrn1Q8K445 Olfr693-201ENSMUST00000057817 952 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Clrn1Q8K445 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Clrn1Q8K445 Gm4822-201ENSMUST00000077551 479 ntBASIC5.88□□□□□ -1.47
Clrn1Q8K445 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Clrn1Q8K445 Gm37943-201ENSMUST00000194053 3944 ntBASIC5.88□□□□□ -1.47
Clrn1Q8K445 Gm8734-201ENSMUST00000211669 1312 ntBASIC5.88□□□□□ -1.47
Clrn1Q8K445 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
Clrn1Q8K445 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Clrn1Q8K445 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Clrn1Q8K445 Hrnr-201ENSMUST00000090856 10656 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
Clrn1Q8K445 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Clrn1Q8K445 Gm37721-202ENSMUST00000194673 1498 ntTSL 5 BASIC5.88□□□□□ -1.47
Clrn1Q8K445 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Clrn1Q8K445 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Clrn1Q8K445 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC5.88□□□□□ -1.47
Clrn1Q8K445 Poln-205ENSMUST00000202409 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Clrn1Q8K445 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Clrn1Q8K445 Map2-201ENSMUST00000024639 5195 ntTSL 5 BASIC5.88□□□□□ -1.47
Clrn1Q8K445 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC5.88□□□□□ -1.47
Clrn1Q8K445 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Clrn1Q8K445 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC5.87□□□□□ -1.47
Clrn1Q8K445 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Clrn1Q8K445 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Clrn1Q8K445 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Clrn1Q8K445 Gm13102-201ENSMUST00000097799 2338 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
Clrn1Q8K445 Gm42940-201ENSMUST00000200361 2362 ntBASIC5.87□□□□□ -1.47
Clrn1Q8K445 Nsun6-203ENSMUST00000114713 2420 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Clrn1Q8K445 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Clrn1Q8K445 Gm45001-201ENSMUST00000208279 2515 ntBASIC5.87□□□□□ -1.47
Clrn1Q8K445 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC5.87□□□□□ -1.47
Clrn1Q8K445 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Clrn1Q8K445 Vmn2r84-201ENSMUST00000094502 3034 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Clrn1Q8K445 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC5.87□□□□□ -1.47
Clrn1Q8K445 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
Clrn1Q8K445 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Clrn1Q8K445 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC5.87□□□□□ -1.47
Clrn1Q8K445 Gm11271-201ENSMUST00000116054 440 ntBASIC5.87□□□□□ -1.47
Clrn1Q8K445 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Clrn1Q8K445 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC5.87□□□□□ -1.47
Clrn1Q8K445 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC5.87□□□□□ -1.47
Clrn1Q8K445 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
Clrn1Q8K445 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC5.87□□□□□ -1.47
Clrn1Q8K445 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Clrn1Q8K445 Gm26393-201ENSMUST00000157625 129 ntBASIC5.87□□□□□ -1.47
Clrn1Q8K445 Gm24211-201ENSMUST00000158264 107 ntBASIC5.87□□□□□ -1.47
Clrn1Q8K445 Gm44370-201ENSMUST00000175436 112 ntBASIC5.87□□□□□ -1.47
Clrn1Q8K445 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Clrn1Q8K445 Gm27163-201ENSMUST00000184767 409 ntBASIC5.87□□□□□ -1.47
Clrn1Q8K445 Gm21877-201ENSMUST00000185640 694 ntBASIC5.87□□□□□ -1.47
Clrn1Q8K445 Gm29234-201ENSMUST00000187452 1262 ntBASIC5.87□□□□□ -1.47
Clrn1Q8K445 Gm29460-201ENSMUST00000188607 714 ntBASIC5.87□□□□□ -1.47
Clrn1Q8K445 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC5.87□□□□□ -1.47
Clrn1Q8K445 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Clrn1Q8K445 Gm17824-201ENSMUST00000197690 805 ntBASIC5.87□□□□□ -1.47
Clrn1Q8K445 Gm42865-201ENSMUST00000197981 613 ntTSL 3 BASIC5.87□□□□□ -1.47
Clrn1Q8K445 Gm42164-201ENSMUST00000198881 379 ntBASIC5.87□□□□□ -1.47
Clrn1Q8K445 Gm7733-201ENSMUST00000199038 919 ntBASIC5.87□□□□□ -1.47
Clrn1Q8K445 Igkv13-82-201ENSMUST00000200308 346 ntBASIC5.87□□□□□ -1.47
Clrn1Q8K445 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC5.87□□□□□ -1.47
Clrn1Q8K445 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC5.87□□□□□ -1.47
Clrn1Q8K445 Gm18205-201ENSMUST00000209215 841 ntBASIC5.87□□□□□ -1.47
Clrn1Q8K445 Gm45474-201ENSMUST00000209471 408 ntBASIC5.87□□□□□ -1.47
Clrn1Q8K445 AL772265.1-201ENSMUST00000214379 305 ntBASIC5.87□□□□□ -1.47
Clrn1Q8K445 AC131654.1-201ENSMUST00000219675 745 ntBASIC5.87□□□□□ -1.47
Clrn1Q8K445 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC5.87□□□□□ -1.47
Clrn1Q8K445 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC5.87□□□□□ -1.47
Clrn1Q8K445 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC5.87□□□□□ -1.47
Clrn1Q8K445 AC123533.2-201ENSMUST00000228176 375 ntBASIC5.87□□□□□ -1.47
Clrn1Q8K445 CT025525.3-201ENSMUST00000228858 366 ntBASIC5.87□□□□□ -1.47
Clrn1Q8K445 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Clrn1Q8K445 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Clrn1Q8K445 Gm26442-201ENSMUST00000082588 153 ntBASIC5.87□□□□□ -1.47
Clrn1Q8K445 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Clrn1Q8K445 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Clrn1Q8K445 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Clrn1Q8K445 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
Clrn1Q8K445 Gm42905-201ENSMUST00000196237 1611 ntBASIC5.87□□□□□ -1.47
Clrn1Q8K445 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC5.87□□□□□ -1.47
Clrn1Q8K445 Gm37181-201ENSMUST00000192513 1727 ntBASIC5.87□□□□□ -1.47
Clrn1Q8K445 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Clrn1Q8K445 Olfr947-ps1-202ENSMUST00000214936 2168 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
Clrn1Q8K445 Gm1966-201ENSMUST00000184540 7293 ntBASIC5.87□□□□□ -1.47
Clrn1Q8K445 Ccr9-201ENSMUST00000111454 2620 ntTSL 5 BASIC5.87□□□□□ -1.47
Clrn1Q8K445 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Clrn1Q8K445 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
Clrn1Q8K445 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Clrn1Q8K445 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Clrn1Q8K445 Ncf2-202ENSMUST00000186568 3550 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Clrn1Q8K445 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Clrn1Q8K445 Stra6l-202ENSMUST00000107782 4009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Clrn1Q8K445 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms