Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 AC154767.2-201ENSMUST00000224584 414 ntBASIC5.48□□□□□ -1.53
Ccdc28bQ8CEG5 AC135086.1-201ENSMUST00000228621 817 ntBASIC5.48□□□□□ -1.53
Ccdc28bQ8CEG5 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc28bQ8CEG5 Gm23737-201ENSMUST00000082547 159 ntBASIC5.48□□□□□ -1.53
Ccdc28bQ8CEG5 Rpl29-202ENSMUST00000098994 583 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
Ccdc28bQ8CEG5 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
Ccdc28bQ8CEG5 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
Ccdc28bQ8CEG5 Vmn1r84-202ENSMUST00000226408 2898 ntAPPRIS ALT2 BASIC5.48□□□□□ -1.53
Ccdc28bQ8CEG5 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC5.48□□□□□ -1.53
Ccdc28bQ8CEG5 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc28bQ8CEG5 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc28bQ8CEG5 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Ccdc28bQ8CEG5 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Gm43745-201ENSMUST00000198085 1883 ntBASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Gm25795-201ENSMUST00000104421 132 ntBASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Ppih-202ENSMUST00000106317 613 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Gm13739-201ENSMUST00000118020 530 ntBASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Gm14783-201ENSMUST00000118900 663 ntBASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Gm13787-201ENSMUST00000120422 168 ntBASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Gm5843-201ENSMUST00000121631 476 ntBASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Gm25291-201ENSMUST00000122795 144 ntBASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Gm23233-201ENSMUST00000157301 137 ntBASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Gm23121-201ENSMUST00000157653 173 ntBASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Gm23762-201ENSMUST00000158348 106 ntBASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Gm25013-201ENSMUST00000158402 128 ntBASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Gm6205-201ENSMUST00000165424 1080 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Gm20778-201ENSMUST00000178524 627 ntBASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Mir6972-201ENSMUST00000184774 64 ntBASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Gm37676-201ENSMUST00000195496 507 ntBASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Gm42458-201ENSMUST00000201914 369 ntBASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Gm19196-201ENSMUST00000209258 357 ntBASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 AC161256.1-201ENSMUST00000217312 213 ntBASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 AC151904.3-201ENSMUST00000219266 895 ntBASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Gm5087-204ENSMUST00000225820 645 ntBASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 AC166105.1-201ENSMUST00000227512 482 ntBASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Gm22155-201ENSMUST00000083836 162 ntBASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Olfr1209-202ENSMUST00000213136 5611 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Abca16-202ENSMUST00000120490 5088 ntAPPRIS P5 TSL 5 BASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Serpinb6c-201ENSMUST00000110273 1325 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Ccdc28bQ8CEG5 Gm14139-202ENSMUST00000109929 1485 ntTSL 5 BASIC5.46□□□□□ -1.53
Ccdc28bQ8CEG5 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
Ccdc28bQ8CEG5 AC166344.3-203ENSMUST00000228117 1466 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
Ccdc28bQ8CEG5 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Ccdc28bQ8CEG5 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Ccdc28bQ8CEG5 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Ccdc28bQ8CEG5 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Ccdc28bQ8CEG5 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
Ccdc28bQ8CEG5 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Ccdc28bQ8CEG5 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC5.46□□□□□ -1.54
Ccdc28bQ8CEG5 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Ccdc28bQ8CEG5 Gm14985-201ENSMUST00000118693 786 ntBASIC5.46□□□□□ -1.54
Ccdc28bQ8CEG5 Gm12804-201ENSMUST00000121030 999 ntBASIC5.46□□□□□ -1.54
Ccdc28bQ8CEG5 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Ccdc28bQ8CEG5 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC5.46□□□□□ -1.54
Ccdc28bQ8CEG5 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Ccdc28bQ8CEG5 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC5.46□□□□□ -1.54
Ccdc28bQ8CEG5 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
Ccdc28bQ8CEG5 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC5.46□□□□□ -1.54
Ccdc28bQ8CEG5 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Ccdc28bQ8CEG5 Gm27148-201ENSMUST00000185086 160 ntBASIC5.46□□□□□ -1.54
Ccdc28bQ8CEG5 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Ccdc28bQ8CEG5 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC5.46□□□□□ -1.54
Ccdc28bQ8CEG5 Fcer1a-202ENSMUST00000193017 826 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Ccdc28bQ8CEG5 Trbv27-201ENSMUST00000193711 277 ntBASIC5.46□□□□□ -1.54
Ccdc28bQ8CEG5 Gm38217-201ENSMUST00000194358 910 ntBASIC5.46□□□□□ -1.54
Ccdc28bQ8CEG5 Eif4e-202ENSMUST00000196990 856 ntTSL 3 BASIC5.46□□□□□ -1.54
Ccdc28bQ8CEG5 Gm44261-201ENSMUST00000203337 209 ntBASIC5.46□□□□□ -1.54
Ccdc28bQ8CEG5 BC024386-204ENSMUST00000209842 688 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
Ccdc28bQ8CEG5 Axdnd1-210ENSMUST00000212747 1238 ntTSL 5 BASIC5.46□□□□□ -1.54
Ccdc28bQ8CEG5 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC5.46□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 92.6 ms