Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm25152-201ENSMUST00000157117 114 ntBASIC6.76□□□□□ -1.33
Vps53Q8CCB4 Gm23149-201ENSMUST00000158837 230 ntBASIC6.76□□□□□ -1.33
Vps53Q8CCB4 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC6.76□□□□□ -1.33
Vps53Q8CCB4 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
Vps53Q8CCB4 Gm1972-201ENSMUST00000181606 964 ntBASIC6.76□□□□□ -1.33
Vps53Q8CCB4 Gm27004-201ENSMUST00000183300 727 ntBASIC6.76□□□□□ -1.33
Vps53Q8CCB4 Gm28925-201ENSMUST00000188586 168 ntBASIC6.76□□□□□ -1.33
Vps53Q8CCB4 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Vps53Q8CCB4 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Vps53Q8CCB4 Gm37024-201ENSMUST00000192224 868 ntBASIC6.76□□□□□ -1.33
Vps53Q8CCB4 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC6.76□□□□□ -1.33
Vps53Q8CCB4 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC6.76□□□□□ -1.33
Vps53Q8CCB4 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Vps53Q8CCB4 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC6.76□□□□□ -1.33
Vps53Q8CCB4 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC6.76□□□□□ -1.33
Vps53Q8CCB4 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Vps53Q8CCB4 Gm9480-201ENSMUST00000198038 616 ntBASIC6.76□□□□□ -1.33
Vps53Q8CCB4 Gm44053-201ENSMUST00000203364 929 ntBASIC6.76□□□□□ -1.33
Vps53Q8CCB4 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC6.76□□□□□ -1.33
Vps53Q8CCB4 AC138284.5-201ENSMUST00000214389 652 ntBASIC6.76□□□□□ -1.33
Vps53Q8CCB4 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC6.76□□□□□ -1.33
Vps53Q8CCB4 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC6.76□□□□□ -1.33
Vps53Q8CCB4 Gm19169-201ENSMUST00000220109 1246 ntBASIC6.76□□□□□ -1.33
Vps53Q8CCB4 AC164618.1-201ENSMUST00000225769 592 ntBASIC6.76□□□□□ -1.33
Vps53Q8CCB4 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Vps53Q8CCB4 1810024B03Rik-201ENSMUST00000056146 1266 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Vps53Q8CCB4 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Vps53Q8CCB4 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Vps53Q8CCB4 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC6.76□□□□□ -1.33
Vps53Q8CCB4 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Vps53Q8CCB4 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC6.76□□□□□ -1.33
Vps53Q8CCB4 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Vps53Q8CCB4 Gm42998-201ENSMUST00000197053 2371 ntBASIC6.76□□□□□ -1.33
Vps53Q8CCB4 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Vps53Q8CCB4 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
Vps53Q8CCB4 Gm42676-201ENSMUST00000197609 2686 ntBASIC6.76□□□□□ -1.33
Vps53Q8CCB4 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Vps53Q8CCB4 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Vps53Q8CCB4 Gm4759-201ENSMUST00000183414 6622 ntBASIC6.76□□□□□ -1.33
Vps53Q8CCB4 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Vps53Q8CCB4 CT025604.1-201ENSMUST00000221111 3436 ntBASIC6.76□□□□□ -1.33
Vps53Q8CCB4 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Vps53Q8CCB4 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC6.76□□□□□ -1.33
Vps53Q8CCB4 Gm37092-201ENSMUST00000193381 1518 ntBASIC6.76□□□□□ -1.33
Vps53Q8CCB4 Gm5594-201ENSMUST00000172712 1429 ntBASIC6.76□□□□□ -1.33
Vps53Q8CCB4 AC121094.1-201ENSMUST00000224766 1345 ntBASIC6.76□□□□□ -1.33
Vps53Q8CCB4 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Vps53Q8CCB4 Gm6125-201ENSMUST00000217983 3472 ntBASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Mir466f-4-201ENSMUST00000116930 121 ntBASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Gm5754-201ENSMUST00000118774 892 ntBASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Gm7927-201ENSMUST00000118818 880 ntBASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Gm14521-201ENSMUST00000119545 350 ntBASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Gm6620-201ENSMUST00000120113 715 ntBASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Mir1903-201ENSMUST00000122574 80 ntBASIC6.75□□□□□ -1.33
Vps53Q8CCB4 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Tbata-207ENSMUST00000140456 953 ntTSL 5 BASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Mir1945-201ENSMUST00000157919 78 ntBASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Gm24741-201ENSMUST00000158857 106 ntBASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Mir3095-201ENSMUST00000175552 87 ntBASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Gm27160-201ENSMUST00000184837 199 ntBASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Gm2325-201ENSMUST00000186637 581 ntBASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Gm6137-201ENSMUST00000187552 578 ntBASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Gm29159-201ENSMUST00000187969 379 ntBASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Gm6140-201ENSMUST00000192494 966 ntBASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Gm18692-201ENSMUST00000193047 511 ntBASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Gm43743-202ENSMUST00000198353 491 ntBASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Gm36535-201ENSMUST00000198395 511 ntTSL 3 BASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Igkv12-66-201ENSMUST00000199305 348 ntBASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Api5-ps-201ENSMUST00000206607 577 ntBASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Noxred1-201ENSMUST00000021423 1101 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Gm18996-201ENSMUST00000214851 755 ntBASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Gm6477-201ENSMUST00000217098 764 ntBASIC6.75□□□□□ -1.33
Vps53Q8CCB4 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC6.75□□□□□ -1.33
Vps53Q8CCB4 AC125190.2-201ENSMUST00000221160 497 ntBASIC6.75□□□□□ -1.33
Vps53Q8CCB4 CT033778.1-201ENSMUST00000224767 767 ntBASIC6.75□□□□□ -1.33
Vps53Q8CCB4 AC107711.2-203ENSMUST00000227827 762 ntBASIC6.75□□□□□ -1.33
Vps53Q8CCB4 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 109.6 ms