Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trim9Q8C7M3 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim9Q8C7M3 Mup3-202ENSMUST00000107472 916 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim9Q8C7M3 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim9Q8C7M3 Gm13428-201ENSMUST00000117540 365 ntBASIC6.31□□□□□ -1.4
Trim9Q8C7M3 Gm13772-201ENSMUST00000118431 317 ntBASIC6.31□□□□□ -1.4
Trim9Q8C7M3 Gm11774-201ENSMUST00000118601 293 ntBASIC6.31□□□□□ -1.4
Trim9Q8C7M3 Gm6427-201ENSMUST00000118721 979 ntBASIC6.31□□□□□ -1.4
Trim9Q8C7M3 Gm11483-201ENSMUST00000119839 247 ntBASIC6.31□□□□□ -1.4
Trim9Q8C7M3 Gm14712-201ENSMUST00000120195 772 ntBASIC6.31□□□□□ -1.4
Trim9Q8C7M3 Gm13261-201ENSMUST00000137351 1020 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trim9Q8C7M3 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC6.31□□□□□ -1.4
Trim9Q8C7M3 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC6.31□□□□□ -1.4
Trim9Q8C7M3 Gm11528-201ENSMUST00000156822 914 ntTSL 2 BASIC6.31□□□□□ -1.4
Trim9Q8C7M3 Gm24692-201ENSMUST00000157761 146 ntBASIC6.31□□□□□ -1.4
Trim9Q8C7M3 Gm15740-201ENSMUST00000159703 1292 ntBASIC6.31□□□□□ -1.4
Trim9Q8C7M3 Gm10177-201ENSMUST00000160052 444 ntBASIC6.31□□□□□ -1.4
Trim9Q8C7M3 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC6.31□□□□□ -1.4
Trim9Q8C7M3 Gm8032-201ENSMUST00000171009 574 ntBASIC6.31□□□□□ -1.4
Trim9Q8C7M3 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC6.31□□□□□ -1.4
Trim9Q8C7M3 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trim9Q8C7M3 Gm28492-201ENSMUST00000190899 1019 ntBASIC6.31□□□□□ -1.4
Trim9Q8C7M3 Gm18529-201ENSMUST00000193025 1257 ntBASIC6.31□□□□□ -1.4
Trim9Q8C7M3 Gm18984-201ENSMUST00000193998 1124 ntBASIC6.31□□□□□ -1.4
Trim9Q8C7M3 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC6.31□□□□□ -1.4
Trim9Q8C7M3 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Trim9Q8C7M3 Gm2926-201ENSMUST00000205625 239 ntBASIC6.31□□□□□ -1.4
Trim9Q8C7M3 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC6.31□□□□□ -1.4
Trim9Q8C7M3 CT485612.1-201ENSMUST00000222555 382 ntBASIC6.31□□□□□ -1.4
Trim9Q8C7M3 CT025686.1-201ENSMUST00000227592 438 ntBASIC6.31□□□□□ -1.4
Trim9Q8C7M3 AC120375.2-202ENSMUST00000228722 397 ntBASIC6.31□□□□□ -1.4
Trim9Q8C7M3 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim9Q8C7M3 Fxyd3-201ENSMUST00000072331 439 ntTSL 2 BASIC6.31□□□□□ -1.4
Trim9Q8C7M3 Gm25131-201ENSMUST00000082653 151 ntBASIC6.31□□□□□ -1.4
Trim9Q8C7M3 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Trim9Q8C7M3 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Trim9Q8C7M3 Gm11290-204ENSMUST00000224688 3042 ntBASIC6.31□□□□□ -1.4
Trim9Q8C7M3 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trim9Q8C7M3 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim9Q8C7M3 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim9Q8C7M3 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trim9Q8C7M3 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trim9Q8C7M3 Ddx4-201ENSMUST00000075748 2762 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim9Q8C7M3 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim9Q8C7M3 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Trim9Q8C7M3 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC6.31□□□□□ -1.4
Trim9Q8C7M3 AL591843.1-201ENSMUST00000223686 3082 ntBASIC6.31□□□□□ -1.4
Trim9Q8C7M3 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Trim9Q8C7M3 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC6.31□□□□□ -1.4
Trim9Q8C7M3 Gm37846-201ENSMUST00000191840 3774 ntBASIC6.31□□□□□ -1.4
Trim9Q8C7M3 Gm42930-201ENSMUST00000200872 3260 ntBASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim9Q8C7M3 AC122769.3-201ENSMUST00000227739 3245 ntBASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Gm28673-201ENSMUST00000186562 1498 ntTSL 5 BASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Gm37344-203ENSMUST00000195490 1498 ntTSL 5 BASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Trbv12-2-201ENSMUST00000103269 385 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Gm12850-201ENSMUST00000119210 436 ntBASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Gm14417-201ENSMUST00000120036 1074 ntBASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Gm5405-201ENSMUST00000120478 609 ntBASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Astx4d-201ENSMUST00000123136 1149 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Gm6182-201ENSMUST00000156439 1208 ntBASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Gm24687-201ENSMUST00000157758 241 ntBASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Astx4a-201ENSMUST00000177683 1149 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Astx1c-201ENSMUST00000177724 1150 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Astx4c-201ENSMUST00000178390 1149 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Astx1b-201ENSMUST00000178608 1150 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Astx2-201ENSMUST00000179135 1150 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Astx4b-201ENSMUST00000179359 1149 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Astx1a-201ENSMUST00000179529 1150 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Astx5-201ENSMUST00000179723 1150 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Gm21718-202ENSMUST00000186974 817 ntTSL 5 BASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Gm28996-201ENSMUST00000190316 721 ntBASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Gm37336-202ENSMUST00000193705 468 ntBASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Gm42454-201ENSMUST00000196805 1181 ntBASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Gm43895-201ENSMUST00000203219 855 ntBASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Gm18255-201ENSMUST00000211316 765 ntBASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Trim9Q8C7M3 AC166369.2-201ENSMUST00000228403 308 ntBASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Vmn1r27-201ENSMUST00000095862 912 ntAPPRIS P2 BASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Gm10780-201ENSMUST00000099459 285 ntBASIC6.3□□□□□ -1.4
Trim9Q8C7M3 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC6.3□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms