Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Trim35Q8C006 n-R5s90-201ENSMUST00000103968 118 ntBASIC8.64□□□□□ -1.03
Trim35Q8C006 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC8.64□□□□□ -1.03
Trim35Q8C006 Gm15836-201ENSMUST00000119952 793 ntBASIC8.64□□□□□ -1.03
Trim35Q8C006 Gm12949-201ENSMUST00000143382 362 ntTSL 3 BASIC8.64□□□□□ -1.03
Trim35Q8C006 Gm24780-201ENSMUST00000157635 143 ntBASIC8.64□□□□□ -1.03
Trim35Q8C006 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC8.64□□□□□ -1.03
Trim35Q8C006 Gm8398-201ENSMUST00000172081 364 ntBASIC8.64□□□□□ -1.03
Trim35Q8C006 Gm18953-201ENSMUST00000175694 300 ntBASIC8.64□□□□□ -1.03
Trim35Q8C006 Mir6382-201ENSMUST00000184055 110 ntBASIC8.64□□□□□ -1.03
Trim35Q8C006 Gm28462-201ENSMUST00000185217 374 ntTSL 5 BASIC8.64□□□□□ -1.03
Trim35Q8C006 Gm29355-201ENSMUST00000188178 697 ntBASIC8.64□□□□□ -1.03
Trim35Q8C006 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Trim35Q8C006 Gm18875-201ENSMUST00000188563 882 ntBASIC8.64□□□□□ -1.03
Trim35Q8C006 Nanog-ps1-201ENSMUST00000188967 250 ntBASIC8.64□□□□□ -1.03
Trim35Q8C006 Gm29003-202ENSMUST00000190434 453 ntTSL 5 BASIC8.64□□□□□ -1.03
Trim35Q8C006 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC8.64□□□□□ -1.03
Trim35Q8C006 Gm30280-201ENSMUST00000192214 262 ntBASIC8.64□□□□□ -1.03
Trim35Q8C006 Gm7182-201ENSMUST00000193351 732 ntBASIC8.64□□□□□ -1.03
Trim35Q8C006 Gm37561-201ENSMUST00000195221 368 ntTSL 5 BASIC8.64□□□□□ -1.03
Trim35Q8C006 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC8.64□□□□□ -1.03
Trim35Q8C006 Gm45092-201ENSMUST00000205944 545 ntTSL 3 BASIC8.64□□□□□ -1.03
Trim35Q8C006 Gm6112-201ENSMUST00000208037 629 ntBASIC8.64□□□□□ -1.03
Trim35Q8C006 4930567H12Rik-202ENSMUST00000212512 766 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trim35Q8C006 Gm19612-201ENSMUST00000218279 982 ntBASIC8.64□□□□□ -1.03
Trim35Q8C006 AC164426.1-201ENSMUST00000225745 929 ntBASIC8.64□□□□□ -1.03
Trim35Q8C006 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC8.64□□□□□ -1.03
Trim35Q8C006 Mir19a-201ENSMUST00000083482 82 ntBASIC8.64□□□□□ -1.03
Trim35Q8C006 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trim35Q8C006 Defa28-201ENSMUST00000098887 400 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Trim35Q8C006 Supt7l-204ENSMUST00000201769 2548 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trim35Q8C006 Gm37066-201ENSMUST00000192713 2061 ntBASIC8.64□□□□□ -1.03
Trim35Q8C006 Gm43896-201ENSMUST00000203440 2032 ntBASIC8.64□□□□□ -1.03
Trim35Q8C006 4933415A04Rik-201ENSMUST00000056256 2009 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Trim35Q8C006 Usp17lb-202ENSMUST00000106814 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trim35Q8C006 Thnsl1-201ENSMUST00000054591 3899 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trim35Q8C006 Il1rl1-203ENSMUST00000173514 2661 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trim35Q8C006 Dnase1l1-202ENSMUST00000075821 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trim35Q8C006 Cntn2-201ENSMUST00000086521 7177 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trim35Q8C006 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC8.64□□□□□ -1.03
Trim35Q8C006 Lrrc23-201ENSMUST00000032218 1470 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Trim35Q8C006 Zfp57-212ENSMUST00000174672 2597 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trim35Q8C006 Gm43679-201ENSMUST00000197051 3677 ntBASIC8.64□□□□□ -1.03
Trim35Q8C006 Cdh26-202ENSMUST00000108912 2908 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Trim35Q8C006 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trim35Q8C006 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trim35Q8C006 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trim35Q8C006 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Trim35Q8C006 Trpm6-201ENSMUST00000040489 6508 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim35Q8C006 Olfr1506-201ENSMUST00000213994 2495 ntAPPRIS P1 TSL 3 BASIC8.63□□□□□ -1.03
Trim35Q8C006 Sbno1-216ENSMUST00000199808 10161 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim35Q8C006 Csde1-216ENSMUST00000199571 3123 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Trim35Q8C006 BC025920-201ENSMUST00000099442 2785 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Trim35Q8C006 Mctp2-201ENSMUST00000079323 5802 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim35Q8C006 Gm8798-202ENSMUST00000213048 2357 ntTSL 5 BASIC8.63□□□□□ -1.03
Trim35Q8C006 Cdhr1-201ENSMUST00000022337 4332 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim35Q8C006 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim35Q8C006 Gm16575-201ENSMUST00000162186 1615 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trim35Q8C006 Gm19719-201ENSMUST00000200934 4230 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trim35Q8C006 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Trim35Q8C006 Gm22003-201ENSMUST00000101885 107 ntBASIC8.63□□□□□ -1.03
Trim35Q8C006 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Trim35Q8C006 Gm25095-201ENSMUST00000104047 131 ntBASIC8.63□□□□□ -1.03
Trim35Q8C006 n-R5s51-201ENSMUST00000104473 123 ntBASIC8.63□□□□□ -1.03
Trim35Q8C006 Cga-202ENSMUST00000108130 609 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Trim35Q8C006 Gm13925-201ENSMUST00000117315 243 ntBASIC8.63□□□□□ -1.03
Trim35Q8C006 Gm15951-201ENSMUST00000118377 400 ntBASIC8.63□□□□□ -1.03
Trim35Q8C006 Gm15002-201ENSMUST00000118406 452 ntBASIC8.63□□□□□ -1.03
Trim35Q8C006 Gm15504-201ENSMUST00000119674 265 ntBASIC8.63□□□□□ -1.03
Trim35Q8C006 Gm15164-201ENSMUST00000122203 271 ntBASIC8.63□□□□□ -1.03
Trim35Q8C006 Gm25045-201ENSMUST00000122670 99 ntBASIC8.63□□□□□ -1.03
Trim35Q8C006 Ctrcos-201ENSMUST00000128368 322 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Trim35Q8C006 Gm15416-201ENSMUST00000131080 442 ntTSL 3 BASIC8.63□□□□□ -1.03
Trim35Q8C006 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC8.63□□□□□ -1.03
Trim35Q8C006 Gm23403-201ENSMUST00000179169 110 ntBASIC8.63□□□□□ -1.03
Trim35Q8C006 Gm22756-201ENSMUST00000180118 107 ntBASIC8.63□□□□□ -1.03
Trim35Q8C006 Gm27997-201ENSMUST00000184942 69 ntBASIC8.63□□□□□ -1.03
Trim35Q8C006 Gm9443-201ENSMUST00000188406 816 ntBASIC8.63□□□□□ -1.03
Trim35Q8C006 Gm42708-201ENSMUST00000196332 905 ntBASIC8.63□□□□□ -1.03
Trim35Q8C006 Gm18100-201ENSMUST00000200897 452 ntBASIC8.63□□□□□ -1.03
Trim35Q8C006 Oaz3-205ENSMUST00000203883 881 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Trim35Q8C006 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC8.63□□□□□ -1.03
Trim35Q8C006 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC8.63□□□□□ -1.03
Trim35Q8C006 AC108846.3-201ENSMUST00000214078 247 ntTSL 5 BASIC8.63□□□□□ -1.03
Trim35Q8C006 AC167202.2-201ENSMUST00000220155 296 ntBASIC8.63□□□□□ -1.03
Trim35Q8C006 AC122774.1-201ENSMUST00000227703 762 ntBASIC8.63□□□□□ -1.03
Trim35Q8C006 Gm8186-201ENSMUST00000053575 386 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Trim35Q8C006 Eif3k-201ENSMUST00000066070 774 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim35Q8C006 Gm26054-201ENSMUST00000083037 107 ntBASIC8.63□□□□□ -1.03
Trim35Q8C006 Gm23264-201ENSMUST00000083372 107 ntBASIC8.63□□□□□ -1.03
Trim35Q8C006 Gm24492-201ENSMUST00000083798 107 ntBASIC8.63□□□□□ -1.03
Trim35Q8C006 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC8.63□□□□□ -1.03
Trim35Q8C006 Fam160a1-202ENSMUST00000118408 4445 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Trim35Q8C006 Ralgps2-204ENSMUST00000172057 6863 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim35Q8C006 Frk-201ENSMUST00000019913 4696 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim35Q8C006 Gm37673-201ENSMUST00000194880 2451 ntBASIC8.63□□□□□ -1.03
Trim35Q8C006 Depdc5-204ENSMUST00000119705 7929 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim35Q8C006 Gm43164-201ENSMUST00000202529 2128 ntBASIC8.63□□□□□ -1.03
Trim35Q8C006 4932438H23Rik-202ENSMUST00000114076 2436 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Trim35Q8C006 Gm19683-201ENSMUST00000209748 1781 ntBASIC8.63□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms