Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC7.75□□□□□ -1.17
Usp47Q8BY87 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Usp47Q8BY87 Gm20519-201ENSMUST00000173684 359 ntBASIC7.75□□□□□ -1.17
Usp47Q8BY87 Gm3307-201ENSMUST00000176164 632 ntBASIC7.75□□□□□ -1.17
Usp47Q8BY87 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC7.75□□□□□ -1.17
Usp47Q8BY87 Gm28683-201ENSMUST00000187134 615 ntBASIC7.75□□□□□ -1.17
Usp47Q8BY87 Olfr1246-201ENSMUST00000187990 1078 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Usp47Q8BY87 Gm28840-205ENSMUST00000189320 615 ntBASIC7.75□□□□□ -1.17
Usp47Q8BY87 Gm28835-203ENSMUST00000190062 615 ntBASIC7.75□□□□□ -1.17
Usp47Q8BY87 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC7.75□□□□□ -1.17
Usp47Q8BY87 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC7.75□□□□□ -1.17
Usp47Q8BY87 AC121947.1-201ENSMUST00000221755 1145 ntBASIC7.75□□□□□ -1.17
Usp47Q8BY87 AL807824.1-201ENSMUST00000223151 183 ntBASIC7.75□□□□□ -1.17
Usp47Q8BY87 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Usp47Q8BY87 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Usp47Q8BY87 AC131667.1-201ENSMUST00000214665 2175 ntBASIC7.75□□□□□ -1.17
Usp47Q8BY87 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Usp47Q8BY87 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Usp47Q8BY87 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Usp47Q8BY87 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC7.75□□□□□ -1.17
Usp47Q8BY87 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC7.75□□□□□ -1.17
Usp47Q8BY87 Sspn-202ENSMUST00000111701 4512 ntTSL 3 BASIC7.75□□□□□ -1.17
Usp47Q8BY87 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Usp47Q8BY87 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC7.75□□□□□ -1.17
Usp47Q8BY87 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Usp47Q8BY87 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Usp47Q8BY87 Ptprc-204ENSMUST00000182755 4611 ntAPPRIS ALT2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Usp47Q8BY87 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Usp47Q8BY87 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
Usp47Q8BY87 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Usp47Q8BY87 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Usp47Q8BY87 1700093J21Rik-201ENSMUST00000143671 648 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Usp47Q8BY87 Gm5946-201ENSMUST00000182340 970 ntBASIC7.74□□□□□ -1.17
Usp47Q8BY87 Gm7496-201ENSMUST00000192573 1034 ntBASIC7.74□□□□□ -1.17
Usp47Q8BY87 Mir409-201ENSMUST00000198153 79 ntBASIC7.74□□□□□ -1.17
Usp47Q8BY87 Gm44330-201ENSMUST00000200106 143 ntBASIC7.74□□□□□ -1.17
Usp47Q8BY87 Gm6828-201ENSMUST00000207902 1186 ntBASIC7.74□□□□□ -1.17
Usp47Q8BY87 Gm45908-201ENSMUST00000212977 1177 ntBASIC7.74□□□□□ -1.17
Usp47Q8BY87 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC7.74□□□□□ -1.17
Usp47Q8BY87 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Usp47Q8BY87 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Usp47Q8BY87 Olfr1406-201ENSMUST00000072395 1063 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Usp47Q8BY87 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Usp47Q8BY87 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Usp47Q8BY87 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Usp47Q8BY87 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Usp47Q8BY87 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC7.74□□□□□ -1.17
Usp47Q8BY87 Gm44801-201ENSMUST00000207644 2060 ntBASIC7.74□□□□□ -1.17
Usp47Q8BY87 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC7.74□□□□□ -1.17
Usp47Q8BY87 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC7.74□□□□□ -1.17
Usp47Q8BY87 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Usp47Q8BY87 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
Usp47Q8BY87 Gm42819-201ENSMUST00000199630 5121 ntBASIC7.73□□□□□ -1.17
Usp47Q8BY87 Sgip1-205ENSMUST00000106882 6061 ntAPPRIS ALT2 TSL 5 BASIC7.73□□□□□ -1.17
Usp47Q8BY87 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC7.73□□□□□ -1.17
Usp47Q8BY87 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC7.73□□□□□ -1.17
Usp47Q8BY87 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC7.73□□□□□ -1.17
Usp47Q8BY87 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Usp47Q8BY87 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC7.73□□□□□ -1.17
Usp47Q8BY87 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC7.73□□□□□ -1.17
Usp47Q8BY87 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC7.73□□□□□ -1.17
Usp47Q8BY87 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Usp47Q8BY87 Gm37421-201ENSMUST00000193088 132 ntBASIC7.73□□□□□ -1.17
Usp47Q8BY87 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Usp47Q8BY87 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Usp47Q8BY87 Il6-204ENSMUST00000199765 963 ntAPPRIS ALT2 TSL 2 BASIC7.73□□□□□ -1.17
Usp47Q8BY87 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Usp47Q8BY87 Gm7825-201ENSMUST00000204046 416 ntBASIC7.73□□□□□ -1.17
Usp47Q8BY87 Gm45070-201ENSMUST00000208100 246 ntBASIC7.73□□□□□ -1.17
Usp47Q8BY87 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC7.73□□□□□ -1.17
Usp47Q8BY87 Gm10610-203ENSMUST00000208877 1206 ntTSL 5 BASIC7.73□□□□□ -1.17
Usp47Q8BY87 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC7.73□□□□□ -1.17
Usp47Q8BY87 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Usp47Q8BY87 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Usp47Q8BY87 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Usp47Q8BY87 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Usp47Q8BY87 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
Usp47Q8BY87 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Usp47Q8BY87 Gm37775-201ENSMUST00000194120 2313 ntBASIC7.73□□□□□ -1.17
Usp47Q8BY87 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC7.73□□□□□ -1.17
Usp47Q8BY87 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
Usp47Q8BY87 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Usp47Q8BY87 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC7.73□□□□□ -1.17
Usp47Q8BY87 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC7.73□□□□□ -1.17
Usp47Q8BY87 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC7.72□□□□□ -1.17
Usp47Q8BY87 Gm11975-201ENSMUST00000118772 481 ntBASIC7.72□□□□□ -1.17
Usp47Q8BY87 Gm11805-201ENSMUST00000121238 600 ntBASIC7.72□□□□□ -1.17
Usp47Q8BY87 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Usp47Q8BY87 Scarna13-201ENSMUST00000158164 275 ntBASIC7.72□□□□□ -1.17
Usp47Q8BY87 Gm7316-201ENSMUST00000165395 445 ntBASIC7.72□□□□□ -1.17
Usp47Q8BY87 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC7.72□□□□□ -1.17
Usp47Q8BY87 Gm27541-201ENSMUST00000184078 122 ntBASIC7.72□□□□□ -1.17
Usp47Q8BY87 Gm29596-201ENSMUST00000185710 385 ntBASIC7.72□□□□□ -1.17
Usp47Q8BY87 Gm2914-201ENSMUST00000186120 328 ntBASIC7.72□□□□□ -1.17
Usp47Q8BY87 Gm19029-201ENSMUST00000189923 564 ntBASIC7.72□□□□□ -1.17
Usp47Q8BY87 Mir6994-201ENSMUST00000198985 73 ntBASIC7.72□□□□□ -1.17
Usp47Q8BY87 Gm45215-201ENSMUST00000206407 395 ntBASIC7.72□□□□□ -1.17
Usp47Q8BY87 AC153870.1-201ENSMUST00000219599 560 ntBASIC7.72□□□□□ -1.17
Usp47Q8BY87 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Usp47Q8BY87 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms