Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Mir7-2-201ENSMUST00000083675 97 ntBASIC5.71□□□□□ -1.5
Nup54Q8BTS4 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nup54Q8BTS4 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Nup54Q8BTS4 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC5.71□□□□□ -1.5
Nup54Q8BTS4 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
Nup54Q8BTS4 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Nup54Q8BTS4 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nup54Q8BTS4 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Nup54Q8BTS4 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Nup54Q8BTS4 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Nup54Q8BTS4 Gm44242-201ENSMUST00000204212 2721 ntBASIC5.71□□□□□ -1.5
Nup54Q8BTS4 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Nup54Q8BTS4 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Nup54Q8BTS4 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
Nup54Q8BTS4 AC158982.1-205ENSMUST00000227339 1876 ntBASIC5.71□□□□□ -1.5
Nup54Q8BTS4 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Mme-205ENSMUST00000194134 8039 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Nup54Q8BTS4 AC158779.2-201ENSMUST00000227902 1947 ntBASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Gm43857-201ENSMUST00000200343 3079 ntBASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Olfr2-205ENSMUST00000214105 5798 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Gm25422-201ENSMUST00000104219 129 ntBASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Gm14836-201ENSMUST00000118567 471 ntBASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Gm11761-201ENSMUST00000121392 445 ntBASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Gm13363-201ENSMUST00000122008 522 ntBASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Gm23883-201ENSMUST00000122686 290 ntBASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Sspnos-201ENSMUST00000139089 826 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Gm24363-201ENSMUST00000158440 311 ntBASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Gm23207-201ENSMUST00000158665 102 ntBASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Gm8582-201ENSMUST00000164061 789 ntBASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Gm29474-201ENSMUST00000187688 379 ntBASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Gm28883-201ENSMUST00000189256 369 ntBASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Clec2j-202ENSMUST00000203658 606 ntBASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Gm3257-201ENSMUST00000207217 675 ntBASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Gm32507-201ENSMUST00000209552 437 ntTSL 5 BASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Gm2961-201ENSMUST00000211074 772 ntBASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Gm18541-201ENSMUST00000215935 538 ntBASIC5.7□□□□□ -1.5
Nup54Q8BTS4 AC154733.1-201ENSMUST00000221126 679 ntTSL 5 BASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Nup54Q8BTS4 AC164618.1-201ENSMUST00000225769 592 ntBASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Olfr352-201ENSMUST00000065416 948 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Nup54Q8BTS4 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Nup54Q8BTS4 n-R5s36-201ENSMUST00000082998 119 ntBASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Gm13590-201ENSMUST00000120183 1588 ntBASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Nup54Q8BTS4 AC124516.3-201ENSMUST00000221302 3613 ntBASIC5.7□□□□□ -1.5
Nup54Q8BTS4 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Vmn1r203-202ENSMUST00000227520 8227 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Tlr5-202ENSMUST00000191820 3818 ntAPPRIS ALT2 BASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Gm38029-201ENSMUST00000192669 2090 ntBASIC5.7□□□□□ -1.5
Nup54Q8BTS4 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Nup54Q8BTS4 Ryr3-201ENSMUST00000080673 15422 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Nup54Q8BTS4 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Nup54Q8BTS4 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC5.69□□□□□ -1.5
Nup54Q8BTS4 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Nup54Q8BTS4 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC5.69□□□□□ -1.5
Nup54Q8BTS4 Dleu2-202ENSMUST00000180917 3544 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Nup54Q8BTS4 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Nup54Q8BTS4 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.69□□□□□ -1.5
Nup54Q8BTS4 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Nup54Q8BTS4 Olfr510-204ENSMUST00000217170 2997 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Nup54Q8BTS4 Vmn2r95-201ENSMUST00000166327 2538 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Nup54Q8BTS4 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Nup54Q8BTS4 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.69□□□□□ -1.5
Nup54Q8BTS4 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Nup54Q8BTS4 AC136019.1-201ENSMUST00000226503 1412 ntBASIC5.69□□□□□ -1.5
Nup54Q8BTS4 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC5.69□□□□□ -1.5
Nup54Q8BTS4 Atp12a-201ENSMUST00000007340 3950 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Nup54Q8BTS4 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Nup54Q8BTS4 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Nup54Q8BTS4 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Nup54Q8BTS4 Fyttd1-202ENSMUST00000120345 648 ntTSL 5 BASIC5.69□□□□□ -1.5
Nup54Q8BTS4 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC5.69□□□□□ -1.5
Nup54Q8BTS4 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC5.69□□□□□ -1.5
Nup54Q8BTS4 Gm25433-201ENSMUST00000158283 286 ntBASIC5.69□□□□□ -1.5
Nup54Q8BTS4 Gm6872-201ENSMUST00000165001 700 ntBASIC5.69□□□□□ -1.5
Nup54Q8BTS4 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC5.69□□□□□ -1.5
Nup54Q8BTS4 Gm27148-201ENSMUST00000185086 160 ntBASIC5.69□□□□□ -1.5
Nup54Q8BTS4 Gm21654-201ENSMUST00000188086 691 ntBASIC5.69□□□□□ -1.5
Nup54Q8BTS4 Gm38185-201ENSMUST00000193195 694 ntBASIC5.69□□□□□ -1.5
Nup54Q8BTS4 Gm4374-201ENSMUST00000204929 424 ntBASIC5.69□□□□□ -1.5
Nup54Q8BTS4 Glud-ps-201ENSMUST00000206310 657 ntBASIC5.69□□□□□ -1.5
Nup54Q8BTS4 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms