Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC5.94□□□□□ -1.46
Ccdc40Q8BI79 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC5.94□□□□□ -1.46
Ccdc40Q8BI79 Gm9429-201ENSMUST00000117804 868 ntBASIC5.94□□□□□ -1.46
Ccdc40Q8BI79 Gm15400-201ENSMUST00000118944 601 ntBASIC5.94□□□□□ -1.46
Ccdc40Q8BI79 Gm11484-201ENSMUST00000119808 338 ntBASIC5.94□□□□□ -1.46
Ccdc40Q8BI79 Gm15022-201ENSMUST00000122074 746 ntBASIC5.94□□□□□ -1.46
Ccdc40Q8BI79 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC5.94□□□□□ -1.46
Ccdc40Q8BI79 Gm26106-201ENSMUST00000157254 228 ntBASIC5.94□□□□□ -1.46
Ccdc40Q8BI79 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC5.94□□□□□ -1.46
Ccdc40Q8BI79 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC5.94□□□□□ -1.46
Ccdc40Q8BI79 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC5.94□□□□□ -1.46
Ccdc40Q8BI79 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC5.94□□□□□ -1.46
Ccdc40Q8BI79 Mirt2-201ENSMUST00000175179 285 ntBASIC5.94□□□□□ -1.46
Ccdc40Q8BI79 Mir3060-201ENSMUST00000175339 83 ntBASIC5.94□□□□□ -1.46
Ccdc40Q8BI79 Gm3650-201ENSMUST00000180600 747 ntBASIC5.94□□□□□ -1.46
Ccdc40Q8BI79 Gm8581-201ENSMUST00000188636 890 ntBASIC5.94□□□□□ -1.46
Ccdc40Q8BI79 Gm19087-201ENSMUST00000191430 946 ntBASIC5.94□□□□□ -1.46
Ccdc40Q8BI79 Gm37191-201ENSMUST00000193346 388 ntBASIC5.94□□□□□ -1.46
Ccdc40Q8BI79 Gm44312-201ENSMUST00000203536 469 ntBASIC5.94□□□□□ -1.46
Ccdc40Q8BI79 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC5.94□□□□□ -1.46
Ccdc40Q8BI79 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Ccdc40Q8BI79 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC5.94□□□□□ -1.46
Ccdc40Q8BI79 AC131029.2-201ENSMUST00000226696 628 ntBASIC5.94□□□□□ -1.46
Ccdc40Q8BI79 Gm25133-201ENSMUST00000082647 130 ntBASIC5.94□□□□□ -1.46
Ccdc40Q8BI79 Snora30-201ENSMUST00000083325 130 ntBASIC5.94□□□□□ -1.46
Ccdc40Q8BI79 Mir365-2-201ENSMUST00000083555 112 ntBASIC5.94□□□□□ -1.46
Ccdc40Q8BI79 Gm1604b-201ENSMUST00000089120 357 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ccdc40Q8BI79 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ccdc40Q8BI79 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
Ccdc40Q8BI79 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Ccdc40Q8BI79 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Ccdc40Q8BI79 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Ccdc40Q8BI79 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Ccdc40Q8BI79 Gm37780-201ENSMUST00000194117 1873 ntBASIC5.94□□□□□ -1.46
Ccdc40Q8BI79 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
Ccdc40Q8BI79 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 A530053G22Rik-205ENSMUST00000205153 1448 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 Olfr1283-202ENSMUST00000204064 1625 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 Gm20486-201ENSMUST00000101544 128 ntBASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 Tex48-201ENSMUST00000102861 677 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 Gm14576-201ENSMUST00000118073 1111 ntBASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 Gm14783-201ENSMUST00000118900 663 ntBASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 Gm14732-201ENSMUST00000121372 545 ntBASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 Gm26046-201ENSMUST00000157312 166 ntBASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 Gm23903-201ENSMUST00000157566 131 ntBASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 Gm5692-201ENSMUST00000187254 1057 ntBASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 Gm5284-201ENSMUST00000199053 903 ntBASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 Gm18537-201ENSMUST00000205709 989 ntBASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 Gm5735-201ENSMUST00000207053 167 ntBASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 Gm4083-201ENSMUST00000207158 451 ntBASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 AC156037.1-201ENSMUST00000221133 127 ntBASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 Gm18413-201ENSMUST00000221573 655 ntBASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 AC125543.3-201ENSMUST00000221991 126 ntBASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 AC131117.1-201ENSMUST00000225154 1171 ntBASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 AC080021.1-201ENSMUST00000228104 700 ntBASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 Gm24207-201ENSMUST00000082781 108 ntBASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 Snord59a-201ENSMUST00000082844 74 ntBASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 Gm37959-201ENSMUST00000191700 2897 ntBASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 Gm42686-201ENSMUST00000199172 4108 ntBASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 Muc15-201ENSMUST00000090332 1318 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 Rgs7-207ENSMUST00000195324 2209 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 Vmn1r171-202ENSMUST00000226128 3063 ntAPPRIS ALT2 BASIC5.93□□□□□ -1.46
Ccdc40Q8BI79 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Gm37553-201ENSMUST00000194135 1602 ntBASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Fbxw27-208ENSMUST00000212725 1483 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Gm38451-201ENSMUST00000208329 2646 ntBASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Gm25917-201ENSMUST00000104267 130 ntBASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Gm26144-201ENSMUST00000104475 132 ntBASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Gm22499-201ENSMUST00000104501 135 ntBASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Olfr407-ps1-201ENSMUST00000117794 866 ntBASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Defa-ps11-201ENSMUST00000119719 299 ntBASIC5.92□□□□□ -1.46
Ccdc40Q8BI79 Gm15781-201ENSMUST00000120216 323 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms