Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm11987-201ENSMUST00000118524 381 ntBASIC6.84□□□□□ -1.31
Shank3Q4ACU6 Gm3267-201ENSMUST00000118671 473 ntBASIC6.84□□□□□ -1.31
Shank3Q4ACU6 Gm25348-201ENSMUST00000158961 111 ntBASIC6.84□□□□□ -1.31
Shank3Q4ACU6 Vmn2r-ps3-201ENSMUST00000176077 1101 ntBASIC6.84□□□□□ -1.31
Shank3Q4ACU6 Gm9173-201ENSMUST00000198054 400 ntBASIC6.84□□□□□ -1.31
Shank3Q4ACU6 Gm18442-201ENSMUST00000220925 639 ntBASIC6.84□□□□□ -1.31
Shank3Q4ACU6 Prl7a1-203ENSMUST00000224852 1283 ntBASIC6.84□□□□□ -1.31
Shank3Q4ACU6 AC154788.1-201ENSMUST00000225003 340 ntBASIC6.84□□□□□ -1.31
Shank3Q4ACU6 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Shank3Q4ACU6 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Shank3Q4ACU6 Ppfia2-203ENSMUST00000217854 8885 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Shank3Q4ACU6 Olfr1278-206ENSMUST00000216229 6819 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Shank3Q4ACU6 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Shank3Q4ACU6 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Shank3Q4ACU6 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Shank3Q4ACU6 Greb1-212ENSMUST00000162112 8058 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.31
Shank3Q4ACU6 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC6.84□□□□□ -1.31
Shank3Q4ACU6 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Shank3Q4ACU6 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Shank3Q4ACU6 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Shank3Q4ACU6 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Shank3Q4ACU6 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Shank3Q4ACU6 Gm29482-201ENSMUST00000187845 230 ntTSL 3 BASIC6.84□□□□□ -1.31
Shank3Q4ACU6 Gm20056-201ENSMUST00000194813 519 ntBASIC6.84□□□□□ -1.31
Shank3Q4ACU6 AC183268.2-201ENSMUST00000214513 446 ntBASIC6.84□□□□□ -1.31
Shank3Q4ACU6 CT025525.4-201ENSMUST00000227728 277 ntBASIC6.84□□□□□ -1.31
Shank3Q4ACU6 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC6.84□□□□□ -1.31
Shank3Q4ACU6 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Shank3Q4ACU6 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Shank3Q4ACU6 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC6.84□□□□□ -1.32
Shank3Q4ACU6 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.32
Shank3Q4ACU6 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
Shank3Q4ACU6 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
Shank3Q4ACU6 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Shank3Q4ACU6 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Shank3Q4ACU6 Mgat4a-205ENSMUST00000151952 7251 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Shank3Q4ACU6 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Shank3Q4ACU6 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
Shank3Q4ACU6 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Shank3Q4ACU6 Mroh2b-201ENSMUST00000045736 4829 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Shank3Q4ACU6 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Shank3Q4ACU6 Ripk1-203ENSMUST00000167374 6472 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Shank3Q4ACU6 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Shank3Q4ACU6 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC6.83□□□□□ -1.32
Shank3Q4ACU6 Olfr516-202ENSMUST00000216092 1493 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
Shank3Q4ACU6 Gm14995-201ENSMUST00000117135 391 ntBASIC6.83□□□□□ -1.32
Shank3Q4ACU6 Gm7206-201ENSMUST00000117730 508 ntBASIC6.83□□□□□ -1.32
Shank3Q4ACU6 Gm12007-201ENSMUST00000120978 597 ntBASIC6.83□□□□□ -1.32
Shank3Q4ACU6 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC6.83□□□□□ -1.32
Shank3Q4ACU6 V1rg10-201ENSMUST00000183378 937 ntBASIC6.83□□□□□ -1.32
Shank3Q4ACU6 Mir7012-201ENSMUST00000183900 64 ntBASIC6.83□□□□□ -1.32
Shank3Q4ACU6 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Shank3Q4ACU6 Gm37209-201ENSMUST00000194109 1276 ntBASIC6.83□□□□□ -1.32
Shank3Q4ACU6 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC6.83□□□□□ -1.32
Shank3Q4ACU6 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC6.83□□□□□ -1.32
Shank3Q4ACU6 CT025665.1-201ENSMUST00000215251 1199 ntBASIC6.83□□□□□ -1.32
Shank3Q4ACU6 AC166258.1-201ENSMUST00000219823 893 ntTSL 3 BASIC6.83□□□□□ -1.32
Shank3Q4ACU6 AC158523.2-201ENSMUST00000222708 548 ntBASIC6.83□□□□□ -1.32
Shank3Q4ACU6 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC6.83□□□□□ -1.32
Shank3Q4ACU6 AC139758.1-201ENSMUST00000226573 930 ntBASIC6.83□□□□□ -1.32
Shank3Q4ACU6 Pkd1l1-203ENSMUST00000178195 6213 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
Shank3Q4ACU6 Epha5-201ENSMUST00000053733 7328 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Shank3Q4ACU6 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC6.83□□□□□ -1.32
Shank3Q4ACU6 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC6.83□□□□□ -1.32
Shank3Q4ACU6 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Shank3Q4ACU6 Gm42676-201ENSMUST00000197609 2686 ntBASIC6.83□□□□□ -1.32
Shank3Q4ACU6 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Shank3Q4ACU6 Nme7-202ENSMUST00000191947 1635 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Shank3Q4ACU6 Dclk1-201ENSMUST00000054237 7847 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Shank3Q4ACU6 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Shank3Q4ACU6 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Shank3Q4ACU6 Adamdec1-201ENSMUST00000022641 2442 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Shank3Q4ACU6 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Shank3Q4ACU6 Olfr906-202ENSMUST00000214344 3775 ntAPPRIS P1 TSL 3 BASIC6.82□□□□□ -1.32
Shank3Q4ACU6 Zfp932-202ENSMUST00000112536 2509 ntTSL 5 BASIC6.82□□□□□ -1.32
Shank3Q4ACU6 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC6.82□□□□□ -1.32
Shank3Q4ACU6 Gm11270-201ENSMUST00000117685 471 ntBASIC6.82□□□□□ -1.32
Shank3Q4ACU6 Gm15670-201ENSMUST00000117740 447 ntBASIC6.82□□□□□ -1.32
Shank3Q4ACU6 Gm13000-201ENSMUST00000120937 496 ntBASIC6.82□□□□□ -1.32
Shank3Q4ACU6 Gm12466-201ENSMUST00000121199 620 ntBASIC6.82□□□□□ -1.32
Shank3Q4ACU6 Gm25293-201ENSMUST00000122792 285 ntBASIC6.82□□□□□ -1.32
Shank3Q4ACU6 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC6.82□□□□□ -1.32
Shank3Q4ACU6 Gm44307-201ENSMUST00000204466 764 ntBASIC6.82□□□□□ -1.32
Shank3Q4ACU6 AC156576.3-201ENSMUST00000221940 452 ntTSL 5 BASIC6.82□□□□□ -1.32
Shank3Q4ACU6 CT025686.1-201ENSMUST00000227592 438 ntBASIC6.82□□□□□ -1.32
Shank3Q4ACU6 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC6.82□□□□□ -1.32
Shank3Q4ACU6 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Shank3Q4ACU6 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Shank3Q4ACU6 Kcnj15-202ENSMUST00000113854 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Shank3Q4ACU6 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Shank3Q4ACU6 Pcdh15-214ENSMUST00000129404 6857 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Shank3Q4ACU6 F5-201ENSMUST00000086040 7430 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Shank3Q4ACU6 Gm45632-201ENSMUST00000211532 1888 ntBASIC6.82□□□□□ -1.32
Shank3Q4ACU6 Gm43085-201ENSMUST00000202859 3132 ntBASIC6.82□□□□□ -1.32
Shank3Q4ACU6 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Shank3Q4ACU6 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Shank3Q4ACU6 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Shank3Q4ACU6 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Shank3Q4ACU6 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Shank3Q4ACU6 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 104.7 ms