Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Col17a1Q07563 Gm12189-201ENSMUST00000119779 912 ntBASIC8.75□□□□□ -1.01
Col17a1Q07563 Gm29124-201ENSMUST00000186576 452 ntBASIC8.75□□□□□ -1.01
Col17a1Q07563 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC8.75□□□□□ -1.01
Col17a1Q07563 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Col17a1Q07563 Gm43803-202ENSMUST00000197765 580 ntTSL 3 BASIC8.75□□□□□ -1.01
Col17a1Q07563 Gm44554-201ENSMUST00000208738 147 ntBASIC8.75□□□□□ -1.01
Col17a1Q07563 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC8.75□□□□□ -1.01
Col17a1Q07563 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Col17a1Q07563 AC137117.1-201ENSMUST00000226912 441 ntBASIC8.75□□□□□ -1.01
Col17a1Q07563 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Col17a1Q07563 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Col17a1Q07563 Heatr5a-201ENSMUST00000040583 7763 ntAPPRIS P2 TSL 5 BASIC8.75□□□□□ -1.01
Col17a1Q07563 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Col17a1Q07563 Naca-202ENSMUST00000092048 6745 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Col17a1Q07563 Unc79-208ENSMUST00000179002 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Col17a1Q07563 Epha5-201ENSMUST00000053733 7328 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Col17a1Q07563 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Col17a1Q07563 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Col17a1Q07563 Peak1-201ENSMUST00000061552 6996 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Col17a1Q07563 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Col17a1Q07563 Nvl-201ENSMUST00000027797 9392 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Col17a1Q07563 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Col17a1Q07563 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
Col17a1Q07563 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Col17a1Q07563 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Col17a1Q07563 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
Col17a1Q07563 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Col17a1Q07563 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Col17a1Q07563 Gm45876-201ENSMUST00000212698 2709 ntBASIC8.74□□□□□ -1.01
Col17a1Q07563 Vmn1r171-201ENSMUST00000078458 1581 ntAPPRIS P2 BASIC8.74□□□□□ -1.01
Col17a1Q07563 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Col17a1Q07563 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC8.74□□□□□ -1.01
Col17a1Q07563 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Col17a1Q07563 Dbi-202ENSMUST00000112648 504 ntTSL 2 BASIC8.74□□□□□ -1.01
Col17a1Q07563 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Col17a1Q07563 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Col17a1Q07563 Gm27234-201ENSMUST00000183362 581 ntTSL 5 BASIC8.74□□□□□ -1.01
Col17a1Q07563 Gm37845-201ENSMUST00000194977 355 ntBASIC8.74□□□□□ -1.01
Col17a1Q07563 Gm44650-201ENSMUST00000206929 194 ntBASIC8.74□□□□□ -1.01
Col17a1Q07563 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC8.74□□□□□ -1.01
Col17a1Q07563 Gm19096-201ENSMUST00000209705 766 ntBASIC8.74□□□□□ -1.01
Col17a1Q07563 AC158981.3-201ENSMUST00000226844 1024 ntBASIC8.74□□□□□ -1.01
Col17a1Q07563 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Col17a1Q07563 Olfr205-201ENSMUST00000074125 990 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Col17a1Q07563 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Col17a1Q07563 Gm23511-201ENSMUST00000083084 164 ntBASIC8.74□□□□□ -1.01
Col17a1Q07563 Fchsd2-201ENSMUST00000032931 4453 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Col17a1Q07563 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Col17a1Q07563 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Col17a1Q07563 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Col17a1Q07563 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
Col17a1Q07563 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Col17a1Q07563 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Col17a1Q07563 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC8.74□□□□□ -1.01
Col17a1Q07563 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Col17a1Q07563 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Col17a1Q07563 Gm37916-201ENSMUST00000192153 2435 ntBASIC8.74□□□□□ -1.01
Col17a1Q07563 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Col17a1Q07563 AC153143.1-201ENSMUST00000222966 1340 ntBASIC8.73□□□□□ -1.01
Col17a1Q07563 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Col17a1Q07563 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Col17a1Q07563 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Col17a1Q07563 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC8.73□□□□□ -1.01
Col17a1Q07563 Sh3kbp1-202ENSMUST00000080394 2980 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Col17a1Q07563 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC8.73□□□□□ -1.01
Col17a1Q07563 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Col17a1Q07563 Scn11a-202ENSMUST00000215718 5899 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Col17a1Q07563 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC8.73□□□□□ -1.01
Col17a1Q07563 Gm15061-201ENSMUST00000121076 1046 ntBASIC8.73□□□□□ -1.01
Col17a1Q07563 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Col17a1Q07563 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC8.73□□□□□ -1.01
Col17a1Q07563 Gm25865-201ENSMUST00000158247 104 ntBASIC8.73□□□□□ -1.01
Col17a1Q07563 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC8.73□□□□□ -1.01
Col17a1Q07563 Gm43405-201ENSMUST00000198642 337 ntBASIC8.73□□□□□ -1.01
Col17a1Q07563 Gm43309-201ENSMUST00000200837 458 ntBASIC8.73□□□□□ -1.01
Col17a1Q07563 Gm44053-201ENSMUST00000203364 929 ntBASIC8.73□□□□□ -1.01
Col17a1Q07563 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC8.73□□□□□ -1.01
Col17a1Q07563 1700054O05Rik-201ENSMUST00000214107 555 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Col17a1Q07563 2900078I11Rik-201ENSMUST00000214556 999 ntBASIC8.73□□□□□ -1.01
Col17a1Q07563 AC155808.1-201ENSMUST00000219288 409 ntBASIC8.73□□□□□ -1.01
Col17a1Q07563 Olfr19-201ENSMUST00000057886 1142 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Col17a1Q07563 Gm24405-201ENSMUST00000083033 167 ntBASIC8.73□□□□□ -1.01
Col17a1Q07563 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Col17a1Q07563 Gm6503-201ENSMUST00000210829 2225 ntBASIC8.73□□□□□ -1.01
Col17a1Q07563 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Col17a1Q07563 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Col17a1Q07563 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC8.72□□□□□ -1.01
Col17a1Q07563 Gm44321-201ENSMUST00000204262 2855 ntBASIC8.72□□□□□ -1.01
Col17a1Q07563 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Col17a1Q07563 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC8.72□□□□□ -1.01
Col17a1Q07563 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Col17a1Q07563 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Col17a1Q07563 Mettl16-205ENSMUST00000141755 12584 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Col17a1Q07563 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Col17a1Q07563 Zfp407-202ENSMUST00000125763 7906 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Col17a1Q07563 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Col17a1Q07563 March1-205ENSMUST00000110255 4177 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
Col17a1Q07563 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC8.72□□□□□ -1.01
Col17a1Q07563 Gm12520-201ENSMUST00000117493 316 ntBASIC8.72□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms