Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col8a1Q00780 Gm15078-201ENSMUST00000118371 782 ntBASIC5.63□□□□□ -1.51
Col8a1Q00780 Gm11746-201ENSMUST00000119843 821 ntBASIC5.63□□□□□ -1.51
Col8a1Q00780 Gm12754-201ENSMUST00000121908 454 ntBASIC5.63□□□□□ -1.51
Col8a1Q00780 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC5.63□□□□□ -1.51
Col8a1Q00780 Gm23229-201ENSMUST00000157297 105 ntBASIC5.63□□□□□ -1.51
Col8a1Q00780 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Col8a1Q00780 Gm18199-201ENSMUST00000173820 835 ntBASIC5.63□□□□□ -1.51
Col8a1Q00780 Gm20543-201ENSMUST00000174200 726 ntBASIC5.63□□□□□ -1.51
Col8a1Q00780 Gm19200-201ENSMUST00000182579 1001 ntBASIC5.63□□□□□ -1.51
Col8a1Q00780 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col8a1Q00780 Gm38279-201ENSMUST00000194067 1131 ntBASIC5.63□□□□□ -1.51
Col8a1Q00780 Gm38041-201ENSMUST00000194445 661 ntBASIC5.63□□□□□ -1.51
Col8a1Q00780 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC5.63□□□□□ -1.51
Col8a1Q00780 Gm36378-201ENSMUST00000201709 388 ntBASIC5.63□□□□□ -1.51
Col8a1Q00780 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC5.63□□□□□ -1.51
Col8a1Q00780 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC5.63□□□□□ -1.51
Col8a1Q00780 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Col8a1Q00780 Gm18205-201ENSMUST00000209215 841 ntBASIC5.63□□□□□ -1.51
Col8a1Q00780 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC5.63□□□□□ -1.51
Col8a1Q00780 Gm45432-201ENSMUST00000210391 416 ntBASIC5.63□□□□□ -1.51
Col8a1Q00780 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col8a1Q00780 Gm31374-202ENSMUST00000214913 914 ntTSL 5 BASIC5.63□□□□□ -1.51
Col8a1Q00780 Olfr1073-ps1-202ENSMUST00000215705 478 ntBASIC5.63□□□□□ -1.51
Col8a1Q00780 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC5.63□□□□□ -1.51
Col8a1Q00780 AC163661.1-201ENSMUST00000216546 910 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col8a1Q00780 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC5.63□□□□□ -1.51
Col8a1Q00780 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC5.63□□□□□ -1.51
Col8a1Q00780 AC153800.1-201ENSMUST00000219212 365 ntBASIC5.63□□□□□ -1.51
Col8a1Q00780 AC122301.1-201ENSMUST00000219625 507 ntBASIC5.63□□□□□ -1.51
Col8a1Q00780 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col8a1Q00780 AC129935.1-201ENSMUST00000226302 873 ntBASIC5.63□□□□□ -1.51
Col8a1Q00780 Gm6195-201ENSMUST00000063059 357 ntBASIC5.63□□□□□ -1.51
Col8a1Q00780 Snora44-201ENSMUST00000082670 129 ntBASIC5.63□□□□□ -1.51
Col8a1Q00780 Gml-201ENSMUST00000096400 957 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col8a1Q00780 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col8a1Q00780 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Col8a1Q00780 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col8a1Q00780 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col8a1Q00780 Zfp345-201ENSMUST00000109914 2734 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col8a1Q00780 Tmem167b-202ENSMUST00000106622 2752 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col8a1Q00780 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Col8a1Q00780 Nsd2-205ENSMUST00000114399 7786 ntTSL 5 BASIC5.63□□□□□ -1.51
Col8a1Q00780 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col8a1Q00780 Gm37653-201ENSMUST00000195401 3578 ntBASIC5.63□□□□□ -1.51
Col8a1Q00780 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col8a1Q00780 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC5.63□□□□□ -1.51
Col8a1Q00780 Mtrr-201ENSMUST00000045827 3692 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col8a1Q00780 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col8a1Q00780 Gm44130-201ENSMUST00000205157 3004 ntBASIC5.63□□□□□ -1.51
Col8a1Q00780 Gm18879-201ENSMUST00000221187 1537 ntBASIC5.63□□□□□ -1.51
Col8a1Q00780 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col8a1Q00780 Gm4991-201ENSMUST00000118899 1552 ntBASIC5.63□□□□□ -1.51
Col8a1Q00780 AC153881.3-201ENSMUST00000218494 1561 ntBASIC5.63□□□□□ -1.51
Col8a1Q00780 Clec4a1-201ENSMUST00000060484 1558 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col8a1Q00780 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col8a1Q00780 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col8a1Q00780 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
Col8a1Q00780 Gm11242-201ENSMUST00000120103 2457 ntBASIC5.63□□□□□ -1.51
Col8a1Q00780 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col8a1Q00780 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col8a1Q00780 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Col8a1Q00780 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col8a1Q00780 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Col8a1Q00780 CT025566.1-202ENSMUST00000224800 2511 ntBASIC5.63□□□□□ -1.51
Col8a1Q00780 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Col8a1Q00780 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Col8a1Q00780 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
Col8a1Q00780 Gm21036-201ENSMUST00000207544 2611 ntBASIC5.62□□□□□ -1.51
Col8a1Q00780 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Col8a1Q00780 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col8a1Q00780 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Col8a1Q00780 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col8a1Q00780 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Col8a1Q00780 Gm6558-201ENSMUST00000191934 1973 ntBASIC5.62□□□□□ -1.51
Col8a1Q00780 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Col8a1Q00780 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Col8a1Q00780 Ino80d-206ENSMUST00000172416 13438 ntTSL 5 BASIC5.62□□□□□ -1.51
Col8a1Q00780 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Col8a1Q00780 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Col8a1Q00780 Gm25919-201ENSMUST00000104271 132 ntBASIC5.62□□□□□ -1.51
Col8a1Q00780 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC5.62□□□□□ -1.51
Col8a1Q00780 Gm7974-201ENSMUST00000117154 408 ntBASIC5.62□□□□□ -1.51
Col8a1Q00780 Gm11798-201ENSMUST00000119150 421 ntBASIC5.62□□□□□ -1.51
Col8a1Q00780 Gm15390-201ENSMUST00000120323 738 ntBASIC5.62□□□□□ -1.51
Col8a1Q00780 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Col8a1Q00780 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC5.62□□□□□ -1.51
Col8a1Q00780 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC5.62□□□□□ -1.51
Col8a1Q00780 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Col8a1Q00780 Vmn1r91-201ENSMUST00000165330 924 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Col8a1Q00780 Gm17085-201ENSMUST00000165425 502 ntBASIC5.62□□□□□ -1.51
Col8a1Q00780 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC5.62□□□□□ -1.51
Col8a1Q00780 Gm26570-201ENSMUST00000180672 342 ntBASIC5.62□□□□□ -1.51
Col8a1Q00780 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC5.62□□□□□ -1.51
Col8a1Q00780 Mir6952-201ENSMUST00000185092 61 ntBASIC5.62□□□□□ -1.51
Col8a1Q00780 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC5.62□□□□□ -1.51
Col8a1Q00780 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC5.62□□□□□ -1.51
Col8a1Q00780 Gm8419-201ENSMUST00000189886 412 ntBASIC5.62□□□□□ -1.51
Col8a1Q00780 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC5.62□□□□□ -1.51
Col8a1Q00780 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms