Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Mir134-201ENSMUST00000083492 71 ntBASIC4.88□□□□□ -1.63
Nkx3-1P97436 Gm37769-201ENSMUST00000193753 2369 ntBASIC4.88□□□□□ -1.63
Nkx3-1P97436 Gm37482-201ENSMUST00000194899 2791 ntBASIC4.88□□□□□ -1.63
Nkx3-1P97436 Gm44255-201ENSMUST00000203456 2053 ntBASIC4.88□□□□□ -1.63
Nkx3-1P97436 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Nkx3-1P97436 Gm45311-201ENSMUST00000211086 1330 ntBASIC4.88□□□□□ -1.63
Nkx3-1P97436 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Nkx3-1P97436 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
Nkx3-1P97436 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Nkx3-1P97436 Pus10-201ENSMUST00000020520 1813 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Nkx3-1P97436 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Nkx3-1P97436 AC136019.1-201ENSMUST00000226503 1412 ntBASIC4.88□□□□□ -1.63
Nkx3-1P97436 Zfp638-220ENSMUST00000204751 9033 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
Nkx3-1P97436 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Nkx3-1P97436 AC155167.2-201ENSMUST00000226127 1945 ntBASIC4.87□□□□□ -1.63
Nkx3-1P97436 AC122769.3-201ENSMUST00000227739 3245 ntBASIC4.87□□□□□ -1.63
Nkx3-1P97436 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC4.87□□□□□ -1.63
Nkx3-1P97436 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Nkx3-1P97436 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Nkx3-1P97436 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Nkx3-1P97436 CT025604.1-201ENSMUST00000221111 3436 ntBASIC4.87□□□□□ -1.63
Nkx3-1P97436 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Nkx3-1P97436 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Nkx3-1P97436 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Nkx3-1P97436 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
Nkx3-1P97436 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Nkx3-1P97436 Tnfaip3-202ENSMUST00000105527 4334 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Nkx3-1P97436 Gm22273-201ENSMUST00000104040 132 ntBASIC4.87□□□□□ -1.63
Nkx3-1P97436 Gm25422-201ENSMUST00000104219 129 ntBASIC4.87□□□□□ -1.63
Nkx3-1P97436 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
Nkx3-1P97436 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Nkx3-1P97436 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC4.87□□□□□ -1.63
Nkx3-1P97436 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC4.87□□□□□ -1.63
Nkx3-1P97436 Gm12808-201ENSMUST00000120597 404 ntBASIC4.87□□□□□ -1.63
Nkx3-1P97436 Gm12267-201ENSMUST00000121609 761 ntBASIC4.87□□□□□ -1.63
Nkx3-1P97436 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC4.87□□□□□ -1.63
Nkx3-1P97436 Gm16725-201ENSMUST00000138744 1253 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Nkx3-1P97436 Gm26069-201ENSMUST00000157497 277 ntBASIC4.87□□□□□ -1.63
Nkx3-1P97436 Mir1963-201ENSMUST00000158594 59 ntBASIC4.87□□□□□ -1.63
Nkx3-1P97436 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Nkx3-1P97436 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Nkx3-1P97436 Gm3170-201ENSMUST00000168753 850 ntBASIC4.87□□□□□ -1.63
Nkx3-1P97436 Gm24103-201ENSMUST00000174930 77 ntBASIC4.87□□□□□ -1.63
Nkx3-1P97436 Gm23799-201ENSMUST00000175559 120 ntBASIC4.87□□□□□ -1.63
Nkx3-1P97436 Gm3348-201ENSMUST00000177813 850 ntBASIC4.87□□□□□ -1.63
Nkx3-1P97436 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC4.87□□□□□ -1.63
Nkx3-1P97436 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC4.87□□□□□ -1.63
Nkx3-1P97436 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Nkx3-1P97436 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Nkx3-1P97436 Gm7825-201ENSMUST00000204046 416 ntBASIC4.87□□□□□ -1.63
Nkx3-1P97436 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC4.87□□□□□ -1.63
Nkx3-1P97436 AC159297.1-201ENSMUST00000218689 290 ntBASIC4.87□□□□□ -1.63
Nkx3-1P97436 Thoc7-209ENSMUST00000225325 765 ntBASIC4.87□□□□□ -1.63
Nkx3-1P97436 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Nkx3-1P97436 Olfr577-201ENSMUST00000051505 939 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Nkx3-1P97436 Olfr705-201ENSMUST00000060879 951 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Nkx3-1P97436 Olfr732-201ENSMUST00000071208 1044 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Nkx3-1P97436 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Nkx3-1P97436 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Nkx3-1P97436 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Nkx3-1P97436 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Nkx3-1P97436 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Nkx3-1P97436 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Nkx3-1P97436 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Nkx3-1P97436 Gm38451-201ENSMUST00000208329 2646 ntBASIC4.87□□□□□ -1.63
Nkx3-1P97436 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Nkx3-1P97436 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Nkx3-1P97436 AC154354.1-201ENSMUST00000224585 2109 ntBASIC4.87□□□□□ -1.63
Nkx3-1P97436 Gm1720-201ENSMUST00000135086 1503 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Nkx3-1P97436 Gm45562-201ENSMUST00000210015 1537 ntBASIC4.87□□□□□ -1.63
Nkx3-1P97436 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Nkx3-1P97436 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Nkx3-1P97436 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Nkx3-1P97436 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Nkx3-1P97436 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Nkx3-1P97436 Gm9923-201ENSMUST00000217785 1836 ntBASIC4.86□□□□□ -1.63
Nkx3-1P97436 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Nkx3-1P97436 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Nkx3-1P97436 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Nkx3-1P97436 Ppp1r1c-202ENSMUST00000090760 2644 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Nkx3-1P97436 AC158779.2-201ENSMUST00000227902 1947 ntBASIC4.86□□□□□ -1.63
Nkx3-1P97436 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Nkx3-1P97436 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Nkx3-1P97436 Gm156-202ENSMUST00000118532 2000 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Nkx3-1P97436 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Nkx3-1P97436 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Nkx3-1P97436 Scgb1b22-ps-201ENSMUST00000116008 280 ntBASIC4.86□□□□□ -1.63
Nkx3-1P97436 Gm6884-201ENSMUST00000119318 615 ntBASIC4.86□□□□□ -1.63
Nkx3-1P97436 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC4.86□□□□□ -1.63
Nkx3-1P97436 Gm14233-201ENSMUST00000149576 439 ntTSL 3 BASIC4.86□□□□□ -1.63
Nkx3-1P97436 Gm23233-201ENSMUST00000157301 137 ntBASIC4.86□□□□□ -1.63
Nkx3-1P97436 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Nkx3-1P97436 Mir7087-201ENSMUST00000184840 70 ntBASIC4.86□□□□□ -1.63
Nkx3-1P97436 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC4.86□□□□□ -1.63
Nkx3-1P97436 Ighv3-2-201ENSMUST00000191842 349 ntBASIC4.86□□□□□ -1.63
Nkx3-1P97436 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC4.86□□□□□ -1.63
Nkx3-1P97436 Gm17992-201ENSMUST00000207346 1072 ntBASIC4.86□□□□□ -1.63
Nkx3-1P97436 Gm19880-201ENSMUST00000207731 318 ntBASIC4.86□□□□□ -1.63
Nkx3-1P97436 AC159886.1-201ENSMUST00000217099 1091 ntBASIC4.86□□□□□ -1.63
Nkx3-1P97436 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC4.86□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms