Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Cux1P53564 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cux1P53564 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Cux1P53564 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cux1P53564 Gm46136-202ENSMUST00000217053 6329 ntTSL 5 BASIC8.43□□□□□ -1.06
Cux1P53564 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Cux1P53564 Mir546-201ENSMUST00000102105 121 ntBASIC8.43□□□□□ -1.06
Cux1P53564 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC8.43□□□□□ -1.06
Cux1P53564 Gm7206-201ENSMUST00000117730 508 ntBASIC8.43□□□□□ -1.06
Cux1P53564 Gm20523-201ENSMUST00000174340 1124 ntBASIC8.43□□□□□ -1.06
Cux1P53564 Mir6963-201ENSMUST00000183535 71 ntBASIC8.43□□□□□ -1.06
Cux1P53564 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC8.43□□□□□ -1.06
Cux1P53564 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC8.43□□□□□ -1.06
Cux1P53564 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Cux1P53564 AC132384.8-201ENSMUST00000218152 1204 ntBASIC8.43□□□□□ -1.06
Cux1P53564 AC153553.1-201ENSMUST00000218257 684 ntBASIC8.43□□□□□ -1.06
Cux1P53564 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC8.43□□□□□ -1.06
Cux1P53564 Celf1-207ENSMUST00000111452 7800 ntAPPRIS P4 TSL 5 BASIC8.43□□□□□ -1.06
Cux1P53564 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Cux1P53564 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
Cux1P53564 Gm45632-201ENSMUST00000211532 1888 ntBASIC8.43□□□□□ -1.06
Cux1P53564 Gm13762-202ENSMUST00000168169 2180 ntAPPRIS P1 TSL 2 BASIC8.42□□□□□ -1.06
Cux1P53564 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Cux1P53564 Gm42676-201ENSMUST00000197609 2686 ntBASIC8.42□□□□□ -1.06
Cux1P53564 Vmn1r12-202ENSMUST00000226866 6639 ntAPPRIS P2 BASIC8.42□□□□□ -1.06
Cux1P53564 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC8.42□□□□□ -1.06
Cux1P53564 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cux1P53564 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Cux1P53564 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cux1P53564 Gm5946-201ENSMUST00000182340 970 ntBASIC8.42□□□□□ -1.06
Cux1P53564 Gm45156-201ENSMUST00000207255 439 ntBASIC8.42□□□□□ -1.06
Cux1P53564 Gm18329-201ENSMUST00000215832 589 ntBASIC8.42□□□□□ -1.06
Cux1P53564 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Cux1P53564 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC8.42□□□□□ -1.06
Cux1P53564 Snord15b-201ENSMUST00000083032 145 ntBASIC8.42□□□□□ -1.06
Cux1P53564 Arfgef3-202ENSMUST00000215836 14579 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cux1P53564 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC8.42□□□□□ -1.06
Cux1P53564 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Cux1P53564 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Cux1P53564 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Cux1P53564 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Cux1P53564 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Cux1P53564 Dzank1-204ENSMUST00000163701 6834 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Cux1P53564 Rad21l-201ENSMUST00000096439 1650 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Cux1P53564 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Cux1P53564 3110067C02Rik-201ENSMUST00000120793 2117 ntBASIC8.41□□□□□ -1.06
Cux1P53564 Gm7919-201ENSMUST00000202043 1389 ntBASIC8.41□□□□□ -1.06
Cux1P53564 Igkv10-95-201ENSMUST00000103329 287 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Cux1P53564 Gm23948-201ENSMUST00000104030 132 ntBASIC8.41□□□□□ -1.06
Cux1P53564 Gm25418-201ENSMUST00000104214 129 ntBASIC8.41□□□□□ -1.06
Cux1P53564 Gm22676-201ENSMUST00000116972 129 ntBASIC8.41□□□□□ -1.06
Cux1P53564 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC8.41□□□□□ -1.06
Cux1P53564 Gm44952-201ENSMUST00000204443 433 ntBASIC8.41□□□□□ -1.06
Cux1P53564 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC8.41□□□□□ -1.06
Cux1P53564 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cux1P53564 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Cux1P53564 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cux1P53564 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Cux1P53564 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cux1P53564 Trpm3-202ENSMUST00000074770 6710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cux1P53564 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cux1P53564 CT009480.3-201ENSMUST00000224051 3032 ntBASIC8.41□□□□□ -1.06
Cux1P53564 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Cux1P53564 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Cux1P53564 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC8.4□□□□□ -1.06
Cux1P53564 Cyp2c50-201ENSMUST00000068094 1643 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Cux1P53564 Hbp1-201ENSMUST00000167458 2733 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Cux1P53564 Gm22266-201ENSMUST00000104011 138 ntBASIC8.4□□□□□ -1.06
Cux1P53564 Gm11833-201ENSMUST00000118393 853 ntBASIC8.4□□□□□ -1.06
Cux1P53564 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Cux1P53564 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC8.4□□□□□ -1.06
Cux1P53564 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC8.4□□□□□ -1.06
Cux1P53564 Gm15790-201ENSMUST00000161109 1251 ntBASIC8.4□□□□□ -1.06
Cux1P53564 Trav3-2-201ENSMUST00000198999 305 ntBASIC8.4□□□□□ -1.06
Cux1P53564 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Cux1P53564 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Cux1P53564 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC8.4□□□□□ -1.06
Cux1P53564 Olfr1342-202ENSMUST00000216226 3269 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
Cux1P53564 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Cux1P53564 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Cux1P53564 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Cux1P53564 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Cux1P53564 Gm33378-201ENSMUST00000219831 2758 ntBASIC8.4□□□□□ -1.07
Cux1P53564 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.07
Cux1P53564 Wdr64-202ENSMUST00000171939 3823 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.07
Cux1P53564 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cux1P53564 AC117769.3-201ENSMUST00000225814 1664 ntBASIC8.39□□□□□ -1.07
Cux1P53564 Gm11561-201ENSMUST00000117429 417 ntBASIC8.39□□□□□ -1.07
Cux1P53564 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC8.39□□□□□ -1.07
Cux1P53564 Gm12422-201ENSMUST00000121431 302 ntBASIC8.39□□□□□ -1.07
Cux1P53564 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Cux1P53564 Gm5353-201ENSMUST00000139800 793 ntBASIC8.39□□□□□ -1.07
Cux1P53564 Gm25348-201ENSMUST00000158961 111 ntBASIC8.39□□□□□ -1.07
Cux1P53564 Gm9173-201ENSMUST00000198054 400 ntBASIC8.39□□□□□ -1.07
Cux1P53564 4930434O05Rik-201ENSMUST00000203259 387 ntBASIC8.39□□□□□ -1.07
Cux1P53564 Gm34224-201ENSMUST00000204606 364 ntBASIC8.39□□□□□ -1.07
Cux1P53564 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC8.39□□□□□ -1.07
Cux1P53564 AC123067.1-201ENSMUST00000217711 462 ntBASIC8.39□□□□□ -1.07
Cux1P53564 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Cux1P53564 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC8.39□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms