Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm18413-201ENSMUST00000221573 655 ntBASIC6.33□□□□□ -1.4
Shmt1P50431 AC162183.1-202ENSMUST00000225434 904 ntBASIC6.33□□□□□ -1.4
Shmt1P50431 AC102815.1-201ENSMUST00000226662 1061 ntBASIC6.33□□□□□ -1.4
Shmt1P50431 AC131997.2-201ENSMUST00000227452 362 ntBASIC6.33□□□□□ -1.4
Shmt1P50431 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Shmt1P50431 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Shmt1P50431 Snora44-201ENSMUST00000082670 129 ntBASIC6.33□□□□□ -1.4
Shmt1P50431 Mir194-1-201ENSMUST00000083647 67 ntBASIC6.33□□□□□ -1.4
Shmt1P50431 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Shmt1P50431 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Shmt1P50431 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Shmt1P50431 Fanci-201ENSMUST00000036865 4645 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Shmt1P50431 Gm34481-201ENSMUST00000214968 3374 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Shmt1P50431 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Shmt1P50431 AC139754.2-201ENSMUST00000218037 1455 ntBASIC6.33□□□□□ -1.4
Shmt1P50431 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Shmt1P50431 Gm43606-201ENSMUST00000195938 3556 ntBASIC6.33□□□□□ -1.4
Shmt1P50431 Chd6-201ENSMUST00000039782 10515 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Shmt1P50431 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Shmt1P50431 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Shmt1P50431 Atp8b4-202ENSMUST00000040149 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Shmt1P50431 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Shmt1P50431 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC6.33□□□□□ -1.4
Shmt1P50431 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
Shmt1P50431 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC6.32□□□□□ -1.4
Shmt1P50431 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.32□□□□□ -1.4
Shmt1P50431 AC122408.2-201ENSMUST00000217901 1391 ntBASIC6.32□□□□□ -1.4
Shmt1P50431 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC6.32□□□□□ -1.4
Shmt1P50431 Gm8700-201ENSMUST00000222187 3054 ntBASIC6.32□□□□□ -1.4
Shmt1P50431 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC6.32□□□□□ -1.4
Shmt1P50431 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Shmt1P50431 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC6.32□□□□□ -1.4
Shmt1P50431 Gm15425-201ENSMUST00000119013 2711 ntBASIC6.32□□□□□ -1.4
Shmt1P50431 Trbv13-2-201ENSMUST00000103270 340 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Shmt1P50431 Gm13770-201ENSMUST00000117149 305 ntBASIC6.32□□□□□ -1.4
Shmt1P50431 Gm6744-201ENSMUST00000119303 543 ntBASIC6.32□□□□□ -1.4
Shmt1P50431 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC6.32□□□□□ -1.4
Shmt1P50431 Gm25782-201ENSMUST00000122526 289 ntBASIC6.32□□□□□ -1.4
Shmt1P50431 Gm25179-201ENSMUST00000122632 128 ntBASIC6.32□□□□□ -1.4
Shmt1P50431 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC6.32□□□□□ -1.4
Shmt1P50431 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Shmt1P50431 Atp2b4-208ENSMUST00000167348 243 ntBASIC6.32□□□□□ -1.4
Shmt1P50431 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Shmt1P50431 Gm38166-201ENSMUST00000191660 471 ntBASIC6.32□□□□□ -1.4
Shmt1P50431 Gm37609-201ENSMUST00000191778 678 ntBASIC6.32□□□□□ -1.4
Shmt1P50431 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Shmt1P50431 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC6.32□□□□□ -1.4
Shmt1P50431 Gm18537-201ENSMUST00000205709 989 ntBASIC6.32□□□□□ -1.4
Shmt1P50431 Gm18892-201ENSMUST00000217628 881 ntBASIC6.32□□□□□ -1.4
Shmt1P50431 Gm5176-201ENSMUST00000218244 1227 ntBASIC6.32□□□□□ -1.4
Shmt1P50431 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Shmt1P50431 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC6.32□□□□□ -1.4
Shmt1P50431 AC127242.4-201ENSMUST00000221242 470 ntBASIC6.32□□□□□ -1.4
Shmt1P50431 AL669819.1-201ENSMUST00000225143 330 ntBASIC6.32□□□□□ -1.4
Shmt1P50431 AC118250.1-201ENSMUST00000228569 875 ntBASIC6.32□□□□□ -1.4
Shmt1P50431 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Shmt1P50431 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Shmt1P50431 Gm23737-201ENSMUST00000082547 159 ntBASIC6.32□□□□□ -1.4
Shmt1P50431 Olfr1105-201ENSMUST00000099868 939 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Shmt1P50431 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Shmt1P50431 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Shmt1P50431 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Shmt1P50431 Ncoa4-201ENSMUST00000111994 3343 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Shmt1P50431 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Shmt1P50431 Fcrl6-201ENSMUST00000094303 1912 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Shmt1P50431 Gm7155-201ENSMUST00000121143 1671 ntBASIC6.32□□□□□ -1.4
Shmt1P50431 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Shmt1P50431 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Shmt1P50431 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Shmt1P50431 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Shmt1P50431 Gm31218-202ENSMUST00000221428 1823 ntTSL 5 BASIC6.32□□□□□ -1.4
Shmt1P50431 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Shmt1P50431 Gm7073-201ENSMUST00000114687 1374 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Shmt1P50431 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Shmt1P50431 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
Shmt1P50431 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm43637-201ENSMUST00000202206 2926 ntBASIC6.31□□□□□ -1.4
Shmt1P50431 Lig4-202ENSMUST00000170033 3105 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm43577-201ENSMUST00000197090 3344 ntBASIC6.31□□□□□ -1.4
Shmt1P50431 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm6125-201ENSMUST00000217983 3472 ntBASIC6.31□□□□□ -1.4
Shmt1P50431 Phf6-203ENSMUST00000154864 3057 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Shmt1P50431 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm13854-201ENSMUST00000121183 1679 ntBASIC6.31□□□□□ -1.4
Shmt1P50431 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm28081-201ENSMUST00000185321 1497 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm29473-201ENSMUST00000185588 1497 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm28668-202ENSMUST00000186549 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Shmt1P50431 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms