Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm14308-202ENSMUST00000117267 777 ntTSL 3 BASIC5.21□□□□□ -1.58
Tnfsf4P43488 Gm16200-201ENSMUST00000120385 331 ntBASIC5.21□□□□□ -1.58
Tnfsf4P43488 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC5.21□□□□□ -1.58
Tnfsf4P43488 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC5.21□□□□□ -1.58
Tnfsf4P43488 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC5.21□□□□□ -1.58
Tnfsf4P43488 Gm25861-201ENSMUST00000158251 109 ntBASIC5.21□□□□□ -1.58
Tnfsf4P43488 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC5.21□□□□□ -1.58
Tnfsf4P43488 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Tnfsf4P43488 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Tnfsf4P43488 Gm37700-201ENSMUST00000192617 965 ntBASIC5.21□□□□□ -1.58
Tnfsf4P43488 Gm2429-201ENSMUST00000194635 586 ntBASIC5.21□□□□□ -1.58
Tnfsf4P43488 Oaz3-204ENSMUST00000199678 935 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Tnfsf4P43488 Gm43243-201ENSMUST00000199964 278 ntBASIC5.21□□□□□ -1.58
Tnfsf4P43488 Gm19060-201ENSMUST00000201959 421 ntBASIC5.21□□□□□ -1.58
Tnfsf4P43488 Gm43748-201ENSMUST00000202329 1233 ntBASIC5.21□□□□□ -1.58
Tnfsf4P43488 Gm8719-201ENSMUST00000203602 534 ntBASIC5.21□□□□□ -1.58
Tnfsf4P43488 Gm7607-201ENSMUST00000214920 518 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Tnfsf4P43488 Gm19174-201ENSMUST00000216944 956 ntBASIC5.21□□□□□ -1.58
Tnfsf4P43488 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Tnfsf4P43488 Gm4012-201ENSMUST00000221504 581 ntBASIC5.21□□□□□ -1.58
Tnfsf4P43488 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.21□□□□□ -1.58
Tnfsf4P43488 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Tnfsf4P43488 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
Tnfsf4P43488 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Tnfsf4P43488 Snord59a-201ENSMUST00000082844 74 ntBASIC5.21□□□□□ -1.58
Tnfsf4P43488 Olfr519-201ENSMUST00000084752 960 ntBASIC5.21□□□□□ -1.58
Tnfsf4P43488 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC5.21□□□□□ -1.58
Tnfsf4P43488 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Tnfsf4P43488 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Tnfsf4P43488 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Tnfsf4P43488 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Tnfsf4P43488 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Tnfsf4P43488 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
Tnfsf4P43488 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Tnfsf4P43488 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Tnfsf4P43488 Gm43175-201ENSMUST00000198450 3810 ntBASIC5.21□□□□□ -1.58
Tnfsf4P43488 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Tnfsf4P43488 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Tnfsf4P43488 AC153494.1-201ENSMUST00000218664 3041 ntBASIC5.21□□□□□ -1.58
Tnfsf4P43488 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Tnfsf4P43488 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Tnfsf4P43488 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Tnfsf4P43488 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Tnfsf4P43488 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC5.2□□□□□ -1.58
Tnfsf4P43488 AL670757.1-201ENSMUST00000223668 1959 ntBASIC5.2□□□□□ -1.58
Tnfsf4P43488 Gm6645-201ENSMUST00000118505 2726 ntBASIC5.2□□□□□ -1.58
Tnfsf4P43488 Gm43466-201ENSMUST00000197836 5214 ntBASIC5.2□□□□□ -1.58
Tnfsf4P43488 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.2□□□□□ -1.58
Tnfsf4P43488 CT025556.1-201ENSMUST00000222965 1884 ntBASIC5.2□□□□□ -1.58
Tnfsf4P43488 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Tnfsf4P43488 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Tnfsf4P43488 Gm4759-201ENSMUST00000183414 6622 ntBASIC5.2□□□□□ -1.58
Tnfsf4P43488 Zfp965-202ENSMUST00000109042 1271 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Tnfsf4P43488 Gm4989-201ENSMUST00000118711 749 ntBASIC5.2□□□□□ -1.58
Tnfsf4P43488 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC5.2□□□□□ -1.58
Tnfsf4P43488 Gm15044-201ENSMUST00000120703 598 ntBASIC5.2□□□□□ -1.58
Tnfsf4P43488 Zfp973-202ENSMUST00000121956 1271 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Tnfsf4P43488 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC5.2□□□□□ -1.58
Tnfsf4P43488 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC5.2□□□□□ -1.58
Tnfsf4P43488 Gm23903-201ENSMUST00000157566 131 ntBASIC5.2□□□□□ -1.58
Tnfsf4P43488 Gm23964-201ENSMUST00000157966 107 ntBASIC5.2□□□□□ -1.58
Tnfsf4P43488 Gm22311-201ENSMUST00000158006 110 ntBASIC5.2□□□□□ -1.58
Tnfsf4P43488 Gm16139-201ENSMUST00000160015 420 ntBASIC5.2□□□□□ -1.58
Tnfsf4P43488 Gm15898-201ENSMUST00000162213 627 ntTSL 3 BASIC5.2□□□□□ -1.58
Tnfsf4P43488 Gm20523-201ENSMUST00000174340 1124 ntBASIC5.2□□□□□ -1.58
Tnfsf4P43488 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC5.2□□□□□ -1.58
Tnfsf4P43488 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Tnfsf4P43488 Gm27754-201ENSMUST00000183340 126 ntBASIC5.2□□□□□ -1.58
Tnfsf4P43488 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Tnfsf4P43488 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC5.2□□□□□ -1.58
Tnfsf4P43488 1700023F02Rik-202ENSMUST00000188279 412 ntTSL 2 BASIC5.2□□□□□ -1.58
Tnfsf4P43488 Gm28640-201ENSMUST00000190918 550 ntBASIC5.2□□□□□ -1.58
Tnfsf4P43488 Gm4374-201ENSMUST00000204929 424 ntBASIC5.2□□□□□ -1.58
Tnfsf4P43488 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Tnfsf4P43488 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC5.2□□□□□ -1.58
Tnfsf4P43488 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
Tnfsf4P43488 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Tnfsf4P43488 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Tnfsf4P43488 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Tnfsf4P43488 Gm22807-201ENSMUST00000082737 129 ntBASIC5.2□□□□□ -1.58
Tnfsf4P43488 Olfr1217-201ENSMUST00000099799 1105 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Tnfsf4P43488 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Tnfsf4P43488 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Tnfsf4P43488 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Tnfsf4P43488 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Tnfsf4P43488 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Tnfsf4P43488 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
Tnfsf4P43488 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Tnfsf4P43488 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC5.2□□□□□ -1.58
Tnfsf4P43488 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Tnfsf4P43488 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Tnfsf4P43488 Gm37930-201ENSMUST00000194308 1886 ntBASIC5.2□□□□□ -1.58
Tnfsf4P43488 Gm45183-201ENSMUST00000207937 1497 ntBASIC5.2□□□□□ -1.58
Tnfsf4P43488 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Tnfsf4P43488 Gm19131-202ENSMUST00000203464 3208 ntBASIC5.19□□□□□ -1.58
Tnfsf4P43488 Gm29488-201ENSMUST00000191427 2402 ntBASIC5.19□□□□□ -1.58
Tnfsf4P43488 AC154640.4-201ENSMUST00000226647 4640 ntBASIC5.19□□□□□ -1.58
Tnfsf4P43488 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Tnfsf4P43488 Gm6503-201ENSMUST00000210829 2225 ntBASIC5.19□□□□□ -1.58
Tnfsf4P43488 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms