Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm44281-201ENSMUST00000203090 166 ntBASIC5.78□□□□□ -1.48
Cxcl12P40224 Gm43919-201ENSMUST00000204303 364 ntBASIC5.78□□□□□ -1.48
Cxcl12P40224 Gm44580-201ENSMUST00000206333 877 ntBASIC5.78□□□□□ -1.48
Cxcl12P40224 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Cxcl12P40224 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC5.78□□□□□ -1.48
Cxcl12P40224 Gm2607-201ENSMUST00000212389 627 ntBASIC5.78□□□□□ -1.48
Cxcl12P40224 Gm21041-201ENSMUST00000214829 823 ntBASIC5.78□□□□□ -1.48
Cxcl12P40224 AC125190.2-201ENSMUST00000221160 497 ntBASIC5.78□□□□□ -1.48
Cxcl12P40224 AC154323.1-201ENSMUST00000228329 1231 ntBASIC5.78□□□□□ -1.48
Cxcl12P40224 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cxcl12P40224 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Cxcl12P40224 Gm23511-201ENSMUST00000083084 164 ntBASIC5.78□□□□□ -1.48
Cxcl12P40224 Gm22741-201ENSMUST00000083438 165 ntBASIC5.78□□□□□ -1.48
Cxcl12P40224 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC5.78□□□□□ -1.48
Cxcl12P40224 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Cxcl12P40224 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cxcl12P40224 Gm44697-201ENSMUST00000207756 1679 ntBASIC5.78□□□□□ -1.48
Cxcl12P40224 AC165080.3-201ENSMUST00000217162 3116 ntBASIC5.78□□□□□ -1.48
Cxcl12P40224 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cxcl12P40224 Ceacam15-201ENSMUST00000108498 1391 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cxcl12P40224 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cxcl12P40224 Olfr48-202ENSMUST00000214428 3848 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Cxcl12P40224 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC5.78□□□□□ -1.48
Cxcl12P40224 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cxcl12P40224 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Cxcl12P40224 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Cxcl12P40224 Gm45117-201ENSMUST00000207250 1774 ntBASIC5.78□□□□□ -1.48
Cxcl12P40224 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
Cxcl12P40224 Kat7-201ENSMUST00000072621 3324 ntTSL 5 BASIC5.77□□□□□ -1.48
Cxcl12P40224 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Cxcl12P40224 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Cxcl12P40224 Gm4847-201ENSMUST00000046662 3012 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cxcl12P40224 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Cxcl12P40224 Gm8853-201ENSMUST00000198366 1344 ntBASIC5.77□□□□□ -1.49
Cxcl12P40224 Slc19a3-203ENSMUST00000164473 1550 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cxcl12P40224 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cxcl12P40224 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC5.77□□□□□ -1.49
Cxcl12P40224 Gm11774-201ENSMUST00000118601 293 ntBASIC5.77□□□□□ -1.49
Cxcl12P40224 Gm15186-201ENSMUST00000119345 563 ntBASIC5.77□□□□□ -1.49
Cxcl12P40224 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Cxcl12P40224 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC5.77□□□□□ -1.49
Cxcl12P40224 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC5.77□□□□□ -1.49
Cxcl12P40224 Scarna13-201ENSMUST00000158164 275 ntBASIC5.77□□□□□ -1.49
Cxcl12P40224 V1rg10-201ENSMUST00000183378 937 ntBASIC5.77□□□□□ -1.49
Cxcl12P40224 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Cxcl12P40224 Gm5288-201ENSMUST00000198323 1119 ntBASIC5.77□□□□□ -1.49
Cxcl12P40224 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC5.77□□□□□ -1.49
Cxcl12P40224 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Cxcl12P40224 CT010486.1-201ENSMUST00000224609 422 ntBASIC5.77□□□□□ -1.49
Cxcl12P40224 n-R5s85-201ENSMUST00000083453 113 ntBASIC5.77□□□□□ -1.49
Cxcl12P40224 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC5.77□□□□□ -1.49
Cxcl12P40224 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cxcl12P40224 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Cxcl12P40224 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
Cxcl12P40224 Gm45001-201ENSMUST00000208279 2515 ntBASIC5.77□□□□□ -1.49
Cxcl12P40224 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Cxcl12P40224 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Cxcl12P40224 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cxcl12P40224 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cxcl12P40224 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC5.76□□□□□ -1.49
Cxcl12P40224 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC5.76□□□□□ -1.49
Cxcl12P40224 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cxcl12P40224 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
Cxcl12P40224 Tnip3-201ENSMUST00000114236 3769 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cxcl12P40224 Gm28320-201ENSMUST00000187777 2273 ntBASIC5.76□□□□□ -1.49
Cxcl12P40224 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC5.76□□□□□ -1.49
Cxcl12P40224 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Cxcl12P40224 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cxcl12P40224 Gm11910-201ENSMUST00000121624 432 ntBASIC5.76□□□□□ -1.49
Cxcl12P40224 Gm13149-201ENSMUST00000122071 339 ntBASIC5.76□□□□□ -1.49
Cxcl12P40224 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cxcl12P40224 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC5.76□□□□□ -1.49
Cxcl12P40224 Gm23954-201ENSMUST00000157213 353 ntBASIC5.76□□□□□ -1.49
Cxcl12P40224 Gm15812-201ENSMUST00000162331 748 ntBASIC5.76□□□□□ -1.49
Cxcl12P40224 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cxcl12P40224 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cxcl12P40224 Ighv3-2-201ENSMUST00000191842 349 ntBASIC5.76□□□□□ -1.49
Cxcl12P40224 Gm44243-201ENSMUST00000204323 692 ntBASIC5.76□□□□□ -1.49
Cxcl12P40224 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC5.76□□□□□ -1.49
Cxcl12P40224 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC5.76□□□□□ -1.49
Cxcl12P40224 Gm6009-201ENSMUST00000210848 280 ntBASIC5.76□□□□□ -1.49
Cxcl12P40224 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Cxcl12P40224 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC5.76□□□□□ -1.49
Cxcl12P40224 Prl7a1-203ENSMUST00000224852 1283 ntBASIC5.76□□□□□ -1.49
Cxcl12P40224 AC136376.1-201ENSMUST00000228496 950 ntBASIC5.76□□□□□ -1.49
Cxcl12P40224 AC118250.1-201ENSMUST00000228569 875 ntBASIC5.76□□□□□ -1.49
Cxcl12P40224 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cxcl12P40224 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Cxcl12P40224 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cxcl12P40224 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cxcl12P40224 Cr2-208ENSMUST00000195120 6212 ntTSL 5 BASIC5.76□□□□□ -1.49
Cxcl12P40224 Synrg-208ENSMUST00000183714 3651 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Cxcl12P40224 Acvr1c-202ENSMUST00000100085 4289 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cxcl12P40224 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cxcl12P40224 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Cxcl12P40224 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cxcl12P40224 AC158605.3-201ENSMUST00000218999 2538 ntBASIC5.76□□□□□ -1.49
Cxcl12P40224 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC5.76□□□□□ -1.49
Cxcl12P40224 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Cxcl12P40224 Asap1-210ENSMUST00000176384 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms