Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Sdc1P18828 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Sdc1P18828 Gm42440-201ENSMUST00000197906 2284 ntBASIC4.47□□□□□ -1.69
Sdc1P18828 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Sdc1P18828 LOC102637012-201ENSMUST00000217248 2562 ntBASIC4.47□□□□□ -1.69
Sdc1P18828 Gm37959-201ENSMUST00000191700 2897 ntBASIC4.47□□□□□ -1.69
Sdc1P18828 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Sdc1P18828 Gm37762-201ENSMUST00000194515 3561 ntBASIC4.47□□□□□ -1.69
Sdc1P18828 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Sdc1P18828 Olfr424-202ENSMUST00000214751 1642 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
Sdc1P18828 Gm37181-201ENSMUST00000192513 1727 ntBASIC4.46□□□□□ -1.69
Sdc1P18828 Gm42841-201ENSMUST00000199806 1932 ntBASIC4.46□□□□□ -1.69
Sdc1P18828 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Sdc1P18828 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.69
Sdc1P18828 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC4.46□□□□□ -1.69
Sdc1P18828 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Sdc1P18828 Mga-201ENSMUST00000046717 11982 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
Sdc1P18828 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Sdc1P18828 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Sdc1P18828 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
Sdc1P18828 Ighv1-84-201ENSMUST00000103551 351 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Sdc1P18828 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC4.46□□□□□ -1.7
Sdc1P18828 Cd47-202ENSMUST00000114496 867 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Sdc1P18828 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
Sdc1P18828 Gm12303-201ENSMUST00000119506 673 ntBASIC4.46□□□□□ -1.7
Sdc1P18828 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC4.46□□□□□ -1.7
Sdc1P18828 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Sdc1P18828 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Sdc1P18828 Gm15970-201ENSMUST00000160623 834 ntBASIC4.46□□□□□ -1.7
Sdc1P18828 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC4.46□□□□□ -1.7
Sdc1P18828 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC4.46□□□□□ -1.7
Sdc1P18828 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC4.46□□□□□ -1.7
Sdc1P18828 Gm8480-201ENSMUST00000190350 698 ntBASIC4.46□□□□□ -1.7
Sdc1P18828 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Sdc1P18828 Gm3544-201ENSMUST00000196129 305 ntBASIC4.46□□□□□ -1.7
Sdc1P18828 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC4.46□□□□□ -1.7
Sdc1P18828 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC4.46□□□□□ -1.7
Sdc1P18828 Gm43596-201ENSMUST00000202818 884 ntBASIC4.46□□□□□ -1.7
Sdc1P18828 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC4.46□□□□□ -1.7
Sdc1P18828 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC4.46□□□□□ -1.7
Sdc1P18828 Gm44896-201ENSMUST00000206190 772 ntBASIC4.46□□□□□ -1.7
Sdc1P18828 AC165349.1-201ENSMUST00000217896 424 ntBASIC4.46□□□□□ -1.7
Sdc1P18828 Gm7413-201ENSMUST00000219498 462 ntBASIC4.46□□□□□ -1.7
Sdc1P18828 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC4.46□□□□□ -1.7
Sdc1P18828 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC4.46□□□□□ -1.7
Sdc1P18828 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Sdc1P18828 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Sdc1P18828 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Sdc1P18828 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC4.46□□□□□ -1.7
Sdc1P18828 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Sdc1P18828 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC4.46□□□□□ -1.7
Sdc1P18828 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Sdc1P18828 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
Sdc1P18828 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Sdc1P18828 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Sdc1P18828 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC4.46□□□□□ -1.7
Sdc1P18828 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Sdc1P18828 Gm43210-201ENSMUST00000196743 6152 ntBASIC4.46□□□□□ -1.7
Sdc1P18828 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Sdc1P18828 Acer3-201ENSMUST00000033020 11340 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm3127-202ENSMUST00000171866 1758 ntAPPRIS P5 TSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm45819-201ENSMUST00000210940 1751 ntBASIC4.45□□□□□ -1.7
Sdc1P18828 AC132852.1-201ENSMUST00000214683 2324 ntBASIC4.45□□□□□ -1.7
Sdc1P18828 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Sdc1P18828 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC4.45□□□□□ -1.7
Sdc1P18828 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm28081-201ENSMUST00000185321 1497 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm29473-201ENSMUST00000185588 1497 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm29061-201ENSMUST00000185900 1499 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm28668-202ENSMUST00000186549 1499 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm29321-201ENSMUST00000186727 1499 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm29393-201ENSMUST00000187002 1499 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm29219-201ENSMUST00000187224 1499 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm28260-201ENSMUST00000187337 1499 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm28225-201ENSMUST00000187730 1499 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm29569-202ENSMUST00000187955 1499 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm29625-201ENSMUST00000188079 1499 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm28735-202ENSMUST00000188159 1499 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm29297-202ENSMUST00000188186 1499 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm29457-201ENSMUST00000188224 1499 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm29190-201ENSMUST00000188255 1499 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm28236-203ENSMUST00000188311 1499 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm28197-203ENSMUST00000188434 1499 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm29070-202ENSMUST00000188541 1499 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm28545-201ENSMUST00000188667 1499 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm29265-201ENSMUST00000188697 1499 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm28947-203ENSMUST00000188701 1499 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm29616-201ENSMUST00000188777 1499 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm29162-202ENSMUST00000188893 1499 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm28606-201ENSMUST00000188938 1499 ntTSL 5 BASIC4.45□□□□□ -1.7
Sdc1P18828 Gm29338-201ENSMUST00000189318 1499 ntTSL 5 BASIC4.45□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms