Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Cdx1P18111 Dsc1-202ENSMUST00000224432 4085 ntAPPRIS ALT2 BASIC4.68□□□□□ -1.66
Cdx1P18111 Olfr453-202ENSMUST00000213997 3082 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Cdx1P18111 Platr21-201ENSMUST00000126339 3511 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Cdx1P18111 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Cdx1P18111 Olfr1268-ps1-201ENSMUST00000117787 2501 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Cdx1P18111 Gm42440-201ENSMUST00000197906 2284 ntBASIC4.67□□□□□ -1.66
Cdx1P18111 Gm37607-201ENSMUST00000194925 2623 ntBASIC4.67□□□□□ -1.66
Cdx1P18111 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Cdx1P18111 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Cdx1P18111 Gm44027-201ENSMUST00000203419 3480 ntBASIC4.67□□□□□ -1.66
Cdx1P18111 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Cdx1P18111 Gm24173-201ENSMUST00000104130 128 ntBASIC4.67□□□□□ -1.66
Cdx1P18111 Gm26289-201ENSMUST00000104169 131 ntBASIC4.67□□□□□ -1.66
Cdx1P18111 Gm25795-201ENSMUST00000104421 132 ntBASIC4.67□□□□□ -1.66
Cdx1P18111 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC4.67□□□□□ -1.66
Cdx1P18111 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC4.67□□□□□ -1.66
Cdx1P18111 Gm4853-201ENSMUST00000119359 394 ntBASIC4.67□□□□□ -1.66
Cdx1P18111 Gm14725-201ENSMUST00000120324 828 ntBASIC4.67□□□□□ -1.66
Cdx1P18111 Gm25782-201ENSMUST00000122526 289 ntBASIC4.67□□□□□ -1.66
Cdx1P18111 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Cdx1P18111 Mir1960-201ENSMUST00000157488 78 ntBASIC4.67□□□□□ -1.66
Cdx1P18111 Gm23343-201ENSMUST00000158964 143 ntBASIC4.67□□□□□ -1.66
Cdx1P18111 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Cdx1P18111 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Cdx1P18111 Gm17366-201ENSMUST00000167629 187 ntBASIC4.67□□□□□ -1.66
Cdx1P18111 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC4.67□□□□□ -1.66
Cdx1P18111 Gm4832-202ENSMUST00000183295 375 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Cdx1P18111 Mir7222-201ENSMUST00000183740 75 ntBASIC4.67□□□□□ -1.66
Cdx1P18111 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC4.67□□□□□ -1.66
Cdx1P18111 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
Cdx1P18111 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Cdx1P18111 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC4.67□□□□□ -1.66
Cdx1P18111 Gm38097-201ENSMUST00000192936 439 ntBASIC4.67□□□□□ -1.66
Cdx1P18111 Gm37838-201ENSMUST00000194464 312 ntBASIC4.67□□□□□ -1.66
Cdx1P18111 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC4.67□□□□□ -1.66
Cdx1P18111 Gm43744-201ENSMUST00000196387 688 ntBASIC4.67□□□□□ -1.66
Cdx1P18111 Gm2040-201ENSMUST00000202979 289 ntBASIC4.67□□□□□ -1.66
Cdx1P18111 Gm44206-201ENSMUST00000203044 592 ntTSL 5 BASIC4.67□□□□□ -1.66
Cdx1P18111 9530003J23Rik-201ENSMUST00000020392 1233 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Cdx1P18111 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC4.67□□□□□ -1.66
Cdx1P18111 Gm18467-201ENSMUST00000208805 434 ntBASIC4.67□□□□□ -1.66
Cdx1P18111 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC4.67□□□□□ -1.66
Cdx1P18111 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC4.67□□□□□ -1.66
Cdx1P18111 AC151904.3-201ENSMUST00000219266 895 ntBASIC4.67□□□□□ -1.66
Cdx1P18111 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC4.67□□□□□ -1.66
Cdx1P18111 Gm32526-201ENSMUST00000221878 981 ntBASIC4.67□□□□□ -1.66
Cdx1P18111 AC154250.1-201ENSMUST00000224775 489 ntBASIC4.67□□□□□ -1.66
Cdx1P18111 AC154795.1-201ENSMUST00000225611 364 ntBASIC4.67□□□□□ -1.66
Cdx1P18111 AC105407.1-201ENSMUST00000225684 614 ntBASIC4.67□□□□□ -1.66
Cdx1P18111 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
Cdx1P18111 AC159979.1-201ENSMUST00000227927 342 ntBASIC4.67□□□□□ -1.66
Cdx1P18111 AC118250.1-201ENSMUST00000228569 875 ntBASIC4.67□□□□□ -1.66
Cdx1P18111 Gm8526-201ENSMUST00000079153 475 ntBASIC4.67□□□□□ -1.66
Cdx1P18111 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Cdx1P18111 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC4.67□□□□□ -1.66
Cdx1P18111 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Cdx1P18111 4930567H17Rik-201ENSMUST00000092405 840 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Cdx1P18111 n-R5s58-201ENSMUST00000093682 119 ntBASIC4.67□□□□□ -1.66
Cdx1P18111 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC4.67□□□□□ -1.66
Cdx1P18111 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Cdx1P18111 Gm38142-201ENSMUST00000194093 3555 ntBASIC4.67□□□□□ -1.66
Cdx1P18111 Tgif1-211ENSMUST00000186358 1455 ntTSL 3 BASIC4.67□□□□□ -1.66
Cdx1P18111 Gm19093-201ENSMUST00000210671 1454 ntBASIC4.67□□□□□ -1.66
Cdx1P18111 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Cdx1P18111 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Cdx1P18111 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC4.67□□□□□ -1.66
Cdx1P18111 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Cdx1P18111 Gm37509-201ENSMUST00000194867 3169 ntBASIC4.67□□□□□ -1.66
Cdx1P18111 Angptl1-201ENSMUST00000027885 2651 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
Cdx1P18111 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
Cdx1P18111 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Cdx1P18111 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Cdx1P18111 AC127371.2-201ENSMUST00000228108 1933 ntBASIC4.66□□□□□ -1.66
Cdx1P18111 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
Cdx1P18111 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Cdx1P18111 Gm37897-201ENSMUST00000192613 3561 ntBASIC4.66□□□□□ -1.66
Cdx1P18111 Gm15189-201ENSMUST00000121164 1966 ntBASIC4.66□□□□□ -1.66
Cdx1P18111 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC4.66□□□□□ -1.66
Cdx1P18111 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
Cdx1P18111 Gm24434-201ENSMUST00000104081 132 ntBASIC4.66□□□□□ -1.66
Cdx1P18111 Gm25415-201ENSMUST00000104220 132 ntBASIC4.66□□□□□ -1.66
Cdx1P18111 Gm14520-201ENSMUST00000119258 387 ntBASIC4.66□□□□□ -1.66
Cdx1P18111 Gm14712-201ENSMUST00000120195 772 ntBASIC4.66□□□□□ -1.66
Cdx1P18111 Gm12890-201ENSMUST00000120885 373 ntBASIC4.66□□□□□ -1.66
Cdx1P18111 Gm12322-201ENSMUST00000121605 389 ntBASIC4.66□□□□□ -1.66
Cdx1P18111 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC4.66□□□□□ -1.66
Cdx1P18111 Gm15534-201ENSMUST00000137642 562 ntBASIC4.66□□□□□ -1.66
Cdx1P18111 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC4.66□□□□□ -1.66
Cdx1P18111 Gm23902-201ENSMUST00000157571 134 ntBASIC4.66□□□□□ -1.66
Cdx1P18111 Gm24690-201ENSMUST00000157759 97 ntBASIC4.66□□□□□ -1.66
Cdx1P18111 Gm23071-201ENSMUST00000158242 115 ntBASIC4.66□□□□□ -1.66
Cdx1P18111 Gm7152-201ENSMUST00000163570 605 ntBASIC4.66□□□□□ -1.66
Cdx1P18111 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Cdx1P18111 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC4.66□□□□□ -1.66
Cdx1P18111 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Cdx1P18111 Gm21542-201ENSMUST00000182307 993 ntBASIC4.66□□□□□ -1.66
Cdx1P18111 Gm9320-201ENSMUST00000184151 473 ntBASIC4.66□□□□□ -1.66
Cdx1P18111 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.66□□□□□ -1.66
Cdx1P18111 Gm38122-201ENSMUST00000192679 885 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 67.8 ms