Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Lire1P11260 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC5.71□□□□□ -1.5
Lire1P11260 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC5.71□□□□□ -1.5
Lire1P11260 Gm11256-201ENSMUST00000118109 829 ntBASIC5.71□□□□□ -1.5
Lire1P11260 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC5.71□□□□□ -1.5
Lire1P11260 Gm15967-201ENSMUST00000120027 1116 ntBASIC5.71□□□□□ -1.5
Lire1P11260 Gm14434-201ENSMUST00000120521 559 ntTSL 3 BASIC5.71□□□□□ -1.5
Lire1P11260 Gm14054-201ENSMUST00000120744 704 ntBASIC5.71□□□□□ -1.5
Lire1P11260 Gm23884-201ENSMUST00000122687 294 ntBASIC5.71□□□□□ -1.5
Lire1P11260 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC5.71□□□□□ -1.5
Lire1P11260 Gm12609-201ENSMUST00000129908 610 ntTSL 2 BASIC5.71□□□□□ -1.5
Lire1P11260 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
Lire1P11260 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Lire1P11260 Gm11545-201ENSMUST00000146507 375 ntBASIC5.71□□□□□ -1.5
Lire1P11260 Gm24395-201ENSMUST00000158139 125 ntBASIC5.71□□□□□ -1.5
Lire1P11260 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC5.71□□□□□ -1.5
Lire1P11260 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.5
Lire1P11260 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Lire1P11260 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Lire1P11260 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.5
Lire1P11260 Gm17044-201ENSMUST00000168549 828 ntBASIC5.71□□□□□ -1.5
Lire1P11260 BC050972-202ENSMUST00000169153 467 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Lire1P11260 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC5.71□□□□□ -1.5
Lire1P11260 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC5.71□□□□□ -1.5
Lire1P11260 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Lire1P11260 Gm21542-201ENSMUST00000182307 993 ntBASIC5.71□□□□□ -1.5
Lire1P11260 Gm6693-201ENSMUST00000189583 813 ntBASIC5.71□□□□□ -1.5
Lire1P11260 Gm38334-201ENSMUST00000195060 313 ntBASIC5.71□□□□□ -1.5
Lire1P11260 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC5.71□□□□□ -1.5
Lire1P11260 Gm43825-201ENSMUST00000199650 734 ntBASIC5.71□□□□□ -1.5
Lire1P11260 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
Lire1P11260 Gm8106-201ENSMUST00000213123 523 ntBASIC5.71□□□□□ -1.5
Lire1P11260 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC5.71□□□□□ -1.5
Lire1P11260 Gm18103-201ENSMUST00000216621 779 ntBASIC5.71□□□□□ -1.5
Lire1P11260 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Lire1P11260 Gm5612-201ENSMUST00000053326 375 ntBASIC5.71□□□□□ -1.5
Lire1P11260 Gm5341-201ENSMUST00000058881 489 ntBASIC5.71□□□□□ -1.5
Lire1P11260 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Lire1P11260 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Lire1P11260 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Lire1P11260 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.71□□□□□ -1.5
Lire1P11260 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Lire1P11260 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Lire1P11260 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Lire1P11260 Slc10a5-201ENSMUST00000078748 3923 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Lire1P11260 Fchsd2-202ENSMUST00000098250 4316 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Lire1P11260 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Lire1P11260 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
Lire1P11260 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Lire1P11260 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Lire1P11260 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Lire1P11260 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Lire1P11260 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC5.71□□□□□ -1.5
Lire1P11260 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Lire1P11260 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Lire1P11260 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Lire1P11260 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Lire1P11260 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Lire1P11260 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Lire1P11260 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lire1P11260 Gm37329-201ENSMUST00000192973 2057 ntBASIC5.7□□□□□ -1.5
Lire1P11260 Dazl-201ENSMUST00000010736 2942 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lire1P11260 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.7□□□□□ -1.5
Lire1P11260 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lire1P11260 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lire1P11260 Gm5133-201ENSMUST00000118940 1255 ntBASIC5.7□□□□□ -1.5
Lire1P11260 Gm12565-201ENSMUST00000119004 649 ntBASIC5.7□□□□□ -1.5
Lire1P11260 Gm15621-201ENSMUST00000119162 364 ntBASIC5.7□□□□□ -1.5
Lire1P11260 Mup-ps21-201ENSMUST00000119998 448 ntBASIC5.7□□□□□ -1.5
Lire1P11260 Gm14900-201ENSMUST00000120304 733 ntBASIC5.7□□□□□ -1.5
Lire1P11260 Gm11255-201ENSMUST00000120448 1180 ntBASIC5.7□□□□□ -1.5
Lire1P11260 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC5.7□□□□□ -1.5
Lire1P11260 Gm26169-201ENSMUST00000158420 135 ntBASIC5.7□□□□□ -1.5
Lire1P11260 Gm15740-201ENSMUST00000159703 1292 ntBASIC5.7□□□□□ -1.5
Lire1P11260 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
Lire1P11260 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC5.7□□□□□ -1.5
Lire1P11260 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC5.7□□□□□ -1.5
Lire1P11260 Gm4214-201ENSMUST00000174451 960 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Lire1P11260 Gm22655-201ENSMUST00000174949 96 ntBASIC5.7□□□□□ -1.5
Lire1P11260 Gm27854-201ENSMUST00000175578 244 ntBASIC5.7□□□□□ -1.5
Lire1P11260 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC5.7□□□□□ -1.5
Lire1P11260 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC5.7□□□□□ -1.5
Lire1P11260 Obox4-ps33-201ENSMUST00000176649 1139 ntBASIC5.7□□□□□ -1.5
Lire1P11260 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
Lire1P11260 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC5.7□□□□□ -1.5
Lire1P11260 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC5.7□□□□□ -1.5
Lire1P11260 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC5.7□□□□□ -1.5
Lire1P11260 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC5.7□□□□□ -1.5
Lire1P11260 Gm44403-201ENSMUST00000198554 129 ntBASIC5.7□□□□□ -1.5
Lire1P11260 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC5.7□□□□□ -1.5
Lire1P11260 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC5.7□□□□□ -1.5
Lire1P11260 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC5.7□□□□□ -1.5
Lire1P11260 Tmem45b-204ENSMUST00000217007 783 ntTSL 2 BASIC5.7□□□□□ -1.5
Lire1P11260 AC151904.3-201ENSMUST00000219266 895 ntBASIC5.7□□□□□ -1.5
Lire1P11260 CT030254.1-201ENSMUST00000225450 1078 ntBASIC5.7□□□□□ -1.5
Lire1P11260 AC154795.1-201ENSMUST00000225611 364 ntBASIC5.7□□□□□ -1.5
Lire1P11260 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Lire1P11260 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Lire1P11260 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC5.7□□□□□ -1.5
Lire1P11260 n-R5s58-201ENSMUST00000093682 119 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms