Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC6.02□□□□□ -1.45
Chmp6P0C0A3 Gm44586-201ENSMUST00000207166 2737 ntBASIC6.01□□□□□ -1.45
Chmp6P0C0A3 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
Chmp6P0C0A3 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Chmp6P0C0A3 Trav6-1-201ENSMUST00000103571 338 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Chmp6P0C0A3 Gm23839-201ENSMUST00000116957 109 ntBASIC6.01□□□□□ -1.45
Chmp6P0C0A3 Hspe1-ps5-201ENSMUST00000118080 297 ntBASIC6.01□□□□□ -1.45
Chmp6P0C0A3 Gm15238-201ENSMUST00000119938 1296 ntBASIC6.01□□□□□ -1.45
Chmp6P0C0A3 Gm13028-201ENSMUST00000128563 277 ntTSL 3 BASIC6.01□□□□□ -1.45
Chmp6P0C0A3 Gm26170-201ENSMUST00000158419 148 ntBASIC6.01□□□□□ -1.45
Chmp6P0C0A3 Gm16112-201ENSMUST00000159075 382 ntBASIC6.01□□□□□ -1.45
Chmp6P0C0A3 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Chmp6P0C0A3 Gm8185-201ENSMUST00000160999 669 ntBASIC6.01□□□□□ -1.45
Chmp6P0C0A3 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC6.01□□□□□ -1.45
Chmp6P0C0A3 Gm6223-201ENSMUST00000178436 871 ntBASIC6.01□□□□□ -1.45
Chmp6P0C0A3 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Chmp6P0C0A3 Gm2367-201ENSMUST00000192374 472 ntBASIC6.01□□□□□ -1.45
Chmp6P0C0A3 Gm9480-201ENSMUST00000198038 616 ntBASIC6.01□□□□□ -1.45
Chmp6P0C0A3 Gm42504-201ENSMUST00000198312 525 ntTSL 3 BASIC6.01□□□□□ -1.45
Chmp6P0C0A3 Gm45259-201ENSMUST00000209217 1006 ntBASIC6.01□□□□□ -1.45
Chmp6P0C0A3 Gm31166-201ENSMUST00000209326 288 ntBASIC6.01□□□□□ -1.45
Chmp6P0C0A3 Gm45722-201ENSMUST00000213075 466 ntBASIC6.01□□□□□ -1.45
Chmp6P0C0A3 AC123832.2-201ENSMUST00000215151 129 ntBASIC6.01□□□□□ -1.45
Chmp6P0C0A3 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC6.01□□□□□ -1.45
Chmp6P0C0A3 Gm8137-201ENSMUST00000218997 463 ntBASIC6.01□□□□□ -1.45
Chmp6P0C0A3 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Chmp6P0C0A3 Gm5087-204ENSMUST00000225820 645 ntBASIC6.01□□□□□ -1.45
Chmp6P0C0A3 AC133203.2-201ENSMUST00000226709 464 ntBASIC6.01□□□□□ -1.45
Chmp6P0C0A3 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Chmp6P0C0A3 Gm7887-201ENSMUST00000056948 537 ntBASIC6.01□□□□□ -1.45
Chmp6P0C0A3 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC6.01□□□□□ -1.45
Chmp6P0C0A3 Lpp-203ENSMUST00000115314 14854 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Chmp6P0C0A3 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC6.01□□□□□ -1.45
Chmp6P0C0A3 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Chmp6P0C0A3 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Chmp6P0C0A3 AC125095.1-201ENSMUST00000228387 2020 ntBASIC6.01□□□□□ -1.45
Chmp6P0C0A3 Mageb18-201ENSMUST00000088137 1571 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Chmp6P0C0A3 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Chmp6P0C0A3 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Chmp6P0C0A3 Gm43857-201ENSMUST00000200343 3079 ntBASIC6□□□□□ -1.45
Chmp6P0C0A3 Gm37049-201ENSMUST00000194356 1983 ntBASIC6□□□□□ -1.45
Chmp6P0C0A3 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Chmp6P0C0A3 AC154368.2-201ENSMUST00000222334 1724 ntBASIC6□□□□□ -1.45
Chmp6P0C0A3 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Chmp6P0C0A3 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC6□□□□□ -1.45
Chmp6P0C0A3 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Chmp6P0C0A3 Gm12303-201ENSMUST00000119506 673 ntBASIC6□□□□□ -1.45
Chmp6P0C0A3 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC6□□□□□ -1.45
Chmp6P0C0A3 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC6□□□□□ -1.45
Chmp6P0C0A3 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC6□□□□□ -1.45
Chmp6P0C0A3 Gm24395-201ENSMUST00000158139 125 ntBASIC6□□□□□ -1.45
Chmp6P0C0A3 Gm3170-201ENSMUST00000168753 850 ntBASIC6□□□□□ -1.45
Chmp6P0C0A3 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC6□□□□□ -1.45
Chmp6P0C0A3 Mir3097-201ENSMUST00000175356 67 ntBASIC6□□□□□ -1.45
Chmp6P0C0A3 Gm3348-201ENSMUST00000177813 850 ntBASIC6□□□□□ -1.45
Chmp6P0C0A3 Mir6911-201ENSMUST00000184241 69 ntBASIC6□□□□□ -1.45
Chmp6P0C0A3 Mir219c-201ENSMUST00000199860 60 ntBASIC6□□□□□ -1.45
Chmp6P0C0A3 Gm44134-202ENSMUST00000204777 545 ntBASIC6□□□□□ -1.45
Chmp6P0C0A3 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC6□□□□□ -1.45
Chmp6P0C0A3 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Chmp6P0C0A3 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC6□□□□□ -1.45
Chmp6P0C0A3 AC153505.2-201ENSMUST00000217741 277 ntBASIC6□□□□□ -1.45
Chmp6P0C0A3 AC154851.1-201ENSMUST00000221591 655 ntBASIC6□□□□□ -1.45
Chmp6P0C0A3 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC6□□□□□ -1.45
Chmp6P0C0A3 AC154616.2-201ENSMUST00000227978 398 ntBASIC6□□□□□ -1.45
Chmp6P0C0A3 AC166574.7-201ENSMUST00000228502 704 ntBASIC6□□□□□ -1.45
Chmp6P0C0A3 CT009600.1-201ENSMUST00000228771 337 ntBASIC6□□□□□ -1.45
Chmp6P0C0A3 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC6□□□□□ -1.45
Chmp6P0C0A3 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC6□□□□□ -1.45
Chmp6P0C0A3 Inpp4b-203ENSMUST00000109852 4095 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Chmp6P0C0A3 Fam107b-209ENSMUST00000226435 3602 ntBASIC6□□□□□ -1.45
Chmp6P0C0A3 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Chmp6P0C0A3 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Chmp6P0C0A3 Gm7680-201ENSMUST00000216198 1348 ntBASIC5.99□□□□□ -1.45
Chmp6P0C0A3 Gm37092-201ENSMUST00000193381 1518 ntBASIC5.99□□□□□ -1.45
Chmp6P0C0A3 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Chmp6P0C0A3 Il18r1-206ENSMUST00000195684 2850 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Chmp6P0C0A3 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC5.99□□□□□ -1.45
Chmp6P0C0A3 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Chmp6P0C0A3 Cd33-203ENSMUST00000205503 5728 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
Chmp6P0C0A3 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC5.99□□□□□ -1.45
Chmp6P0C0A3 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC5.99□□□□□ -1.45
Chmp6P0C0A3 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Chmp6P0C0A3 Gm12850-201ENSMUST00000119210 436 ntBASIC5.99□□□□□ -1.45
Chmp6P0C0A3 Xlr3e-ps-201ENSMUST00000119644 682 ntBASIC5.99□□□□□ -1.45
Chmp6P0C0A3 Gm8430-201ENSMUST00000119780 471 ntBASIC5.99□□□□□ -1.45
Chmp6P0C0A3 Xlr3d-ps-201ENSMUST00000121687 658 ntBASIC5.99□□□□□ -1.45
Chmp6P0C0A3 Gm12732-201ENSMUST00000121688 180 ntBASIC5.99□□□□□ -1.45
Chmp6P0C0A3 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Chmp6P0C0A3 Gm23233-201ENSMUST00000157301 137 ntBASIC5.99□□□□□ -1.45
Chmp6P0C0A3 Gm16139-201ENSMUST00000160015 420 ntBASIC5.99□□□□□ -1.45
Chmp6P0C0A3 Gm6808-201ENSMUST00000162341 807 ntBASIC5.99□□□□□ -1.45
Chmp6P0C0A3 Gm2012-202ENSMUST00000163263 892 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Chmp6P0C0A3 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Chmp6P0C0A3 Gm27854-201ENSMUST00000175578 244 ntBASIC5.99□□□□□ -1.45
Chmp6P0C0A3 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Chmp6P0C0A3 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC5.99□□□□□ -1.45
Chmp6P0C0A3 Gm27855-201ENSMUST00000184122 128 ntBASIC5.99□□□□□ -1.45
Chmp6P0C0A3 Scgb3a2-202ENSMUST00000187157 550 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Chmp6P0C0A3 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms