Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC4.43□□□□□ -1.7
Hmgb3O54879 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC4.43□□□□□ -1.7
Hmgb3O54879 Gm46311-201ENSMUST00000217971 203 ntBASIC4.43□□□□□ -1.7
Hmgb3O54879 AC151904.3-201ENSMUST00000219266 895 ntBASIC4.43□□□□□ -1.7
Hmgb3O54879 Gm7413-201ENSMUST00000219498 462 ntBASIC4.43□□□□□ -1.7
Hmgb3O54879 AC158633.1-201ENSMUST00000219892 649 ntBASIC4.43□□□□□ -1.7
Hmgb3O54879 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC4.43□□□□□ -1.7
Hmgb3O54879 Gm7042-201ENSMUST00000223027 384 ntBASIC4.43□□□□□ -1.7
Hmgb3O54879 AC154417.1-201ENSMUST00000223876 476 ntBASIC4.43□□□□□ -1.7
Hmgb3O54879 AC135086.1-201ENSMUST00000228621 817 ntBASIC4.43□□□□□ -1.7
Hmgb3O54879 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Hmgb3O54879 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Hmgb3O54879 Pon3-201ENSMUST00000031773 1837 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Hmgb3O54879 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Hmgb3O54879 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Hmgb3O54879 Gm43490-201ENSMUST00000197593 2652 ntBASIC4.43□□□□□ -1.7
Hmgb3O54879 Gm37562-201ENSMUST00000194763 4328 ntBASIC4.43□□□□□ -1.7
Hmgb3O54879 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Hmgb3O54879 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Hmgb3O54879 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC4.43□□□□□ -1.7
Hmgb3O54879 Serpina1f-203ENSMUST00000118101 1453 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Hmgb3O54879 Gm45819-201ENSMUST00000210940 1751 ntBASIC4.42□□□□□ -1.7
Hmgb3O54879 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Hmgb3O54879 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Hmgb3O54879 Gm6503-201ENSMUST00000210829 2225 ntBASIC4.42□□□□□ -1.7
Hmgb3O54879 Gm15023-201ENSMUST00000113183 3698 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Hmgb3O54879 AV320801-201ENSMUST00000068340 3698 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Hmgb3O54879 Gm43317-201ENSMUST00000197924 2544 ntBASIC4.42□□□□□ -1.7
Hmgb3O54879 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Hmgb3O54879 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Hmgb3O54879 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Hmgb3O54879 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Hmgb3O54879 4732416N19Rik-201ENSMUST00000203932 3479 ntBASIC4.42□□□□□ -1.7
Hmgb3O54879 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Hmgb3O54879 Snora35-201ENSMUST00000104579 128 ntBASIC4.42□□□□□ -1.7
Hmgb3O54879 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC4.42□□□□□ -1.7
Hmgb3O54879 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC4.42□□□□□ -1.7
Hmgb3O54879 Gm14018-201ENSMUST00000119042 455 ntBASIC4.42□□□□□ -1.7
Hmgb3O54879 Gm14620-201ENSMUST00000120656 383 ntBASIC4.42□□□□□ -1.7
Hmgb3O54879 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC4.42□□□□□ -1.7
Hmgb3O54879 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Hmgb3O54879 Gm15522-201ENSMUST00000134467 785 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Hmgb3O54879 Gm24692-201ENSMUST00000157761 146 ntBASIC4.42□□□□□ -1.7
Hmgb3O54879 Gm15790-201ENSMUST00000161109 1251 ntBASIC4.42□□□□□ -1.7
Hmgb3O54879 Gm9294-201ENSMUST00000165198 789 ntBASIC4.42□□□□□ -1.7
Hmgb3O54879 Gm7952-201ENSMUST00000180540 984 ntBASIC4.42□□□□□ -1.7
Hmgb3O54879 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Hmgb3O54879 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC4.42□□□□□ -1.7
Hmgb3O54879 Gm37444-201ENSMUST00000193605 439 ntBASIC4.42□□□□□ -1.7
Hmgb3O54879 Gm18553-201ENSMUST00000194152 634 ntBASIC4.42□□□□□ -1.7
Hmgb3O54879 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC4.42□□□□□ -1.7
Hmgb3O54879 Gm42961-201ENSMUST00000202023 181 ntBASIC4.42□□□□□ -1.7
Hmgb3O54879 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC4.42□□□□□ -1.7
Hmgb3O54879 Gm44147-201ENSMUST00000204658 94 ntBASIC4.42□□□□□ -1.7
Hmgb3O54879 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC4.42□□□□□ -1.7
Hmgb3O54879 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC4.42□□□□□ -1.7
Hmgb3O54879 1700019J19Rik-202ENSMUST00000213583 1856 ntTSL 5 BASIC4.42□□□□□ -1.7
Hmgb3O54879 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC4.42□□□□□ -1.7
Hmgb3O54879 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Hmgb3O54879 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC4.42□□□□□ -1.7
Hmgb3O54879 AC132384.3-201ENSMUST00000219709 472 ntBASIC4.42□□□□□ -1.7
Hmgb3O54879 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC4.42□□□□□ -1.7
Hmgb3O54879 Gm6068-201ENSMUST00000222270 387 ntBASIC4.42□□□□□ -1.7
Hmgb3O54879 AC154612.1-202ENSMUST00000224806 1725 ntBASIC4.42□□□□□ -1.7
Hmgb3O54879 AC122290.1-201ENSMUST00000225631 1078 ntBASIC4.42□□□□□ -1.7
Hmgb3O54879 AC113031.1-201ENSMUST00000227400 432 ntBASIC4.42□□□□□ -1.7
Hmgb3O54879 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Hmgb3O54879 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Hmgb3O54879 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Hmgb3O54879 Olfr716-201ENSMUST00000098137 1104 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Hmgb3O54879 Gm26835-201ENSMUST00000181888 3274 ntTSL 5 BASIC4.42□□□□□ -1.7
Hmgb3O54879 Smc5-206ENSMUST00000226111 3265 ntBASIC4.42□□□□□ -1.7
Hmgb3O54879 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
Hmgb3O54879 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Hmgb3O54879 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Hmgb3O54879 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Hmgb3O54879 Abcg3-201ENSMUST00000031239 3035 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Hmgb3O54879 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Hmgb3O54879 Gm37760-201ENSMUST00000194726 3841 ntBASIC4.42□□□□□ -1.7
Hmgb3O54879 Nlrp5-203ENSMUST00000108441 3375 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Hmgb3O54879 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Hmgb3O54879 Gm37244-201ENSMUST00000191748 1981 ntBASIC4.42□□□□□ -1.7
Hmgb3O54879 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Hmgb3O54879 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC4.42□□□□□ -1.7
Hmgb3O54879 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC4.42□□□□□ -1.7
Hmgb3O54879 Vmn1r41-201ENSMUST00000204949 1378 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
Hmgb3O54879 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Hmgb3O54879 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Hmgb3O54879 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Hmgb3O54879 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Hmgb3O54879 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Hmgb3O54879 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Hmgb3O54879 Zfp369-202ENSMUST00000126879 2909 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Hmgb3O54879 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Hmgb3O54879 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm24069-201ENSMUST00000104512 127 ntBASIC4.41□□□□□ -1.7
Hmgb3O54879 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm12643-201ENSMUST00000116078 374 ntBASIC4.41□□□□□ -1.7
Hmgb3O54879 Gm12077-201ENSMUST00000117049 364 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 111.7 ms