Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm12110-201ENSMUST00000121601 579 ntBASIC4.66□□□□□ -1.66
Col6a4A2AX52 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Col6a4A2AX52 Gm11846-201ENSMUST00000155156 515 ntTSL 2 BASIC4.66□□□□□ -1.66
Col6a4A2AX52 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Col6a4A2AX52 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col6a4A2AX52 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Col6a4A2AX52 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Col6a4A2AX52 Gm4221-201ENSMUST00000181538 1232 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Col6a4A2AX52 Gm28385-201ENSMUST00000185671 292 ntBASIC4.66□□□□□ -1.66
Col6a4A2AX52 Gm42540-201ENSMUST00000200319 2008 ntBASIC4.66□□□□□ -1.66
Col6a4A2AX52 Gm17984-201ENSMUST00000205286 859 ntBASIC4.66□□□□□ -1.66
Col6a4A2AX52 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC4.66□□□□□ -1.66
Col6a4A2AX52 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC4.66□□□□□ -1.66
Col6a4A2AX52 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC4.66□□□□□ -1.66
Col6a4A2AX52 AC161114.1-201ENSMUST00000218223 474 ntBASIC4.66□□□□□ -1.66
Col6a4A2AX52 CT954323.2-201ENSMUST00000222056 213 ntBASIC4.66□□□□□ -1.66
Col6a4A2AX52 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Col6a4A2AX52 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col6a4A2AX52 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Col6a4A2AX52 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC4.66□□□□□ -1.66
Col6a4A2AX52 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col6a4A2AX52 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col6a4A2AX52 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col6a4A2AX52 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Col6a4A2AX52 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Col6a4A2AX52 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
Col6a4A2AX52 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC4.66□□□□□ -1.66
Col6a4A2AX52 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col6a4A2AX52 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col6a4A2AX52 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
Col6a4A2AX52 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC4.66□□□□□ -1.66
Col6a4A2AX52 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Col6a4A2AX52 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC4.66□□□□□ -1.66
Col6a4A2AX52 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Col6a4A2AX52 Gm23879-201ENSMUST00000116874 126 ntBASIC4.66□□□□□ -1.66
Col6a4A2AX52 Gm12466-201ENSMUST00000121199 620 ntBASIC4.66□□□□□ -1.66
Col6a4A2AX52 Gm24103-201ENSMUST00000174930 77 ntBASIC4.66□□□□□ -1.66
Col6a4A2AX52 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC4.66□□□□□ -1.66
Col6a4A2AX52 Gm28443-201ENSMUST00000189081 698 ntBASIC4.66□□□□□ -1.66
Col6a4A2AX52 2010016I18Rik-203ENSMUST00000189683 841 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Col6a4A2AX52 Gm2429-201ENSMUST00000194635 586 ntBASIC4.66□□□□□ -1.66
Col6a4A2AX52 Gm18427-201ENSMUST00000195422 515 ntBASIC4.66□□□□□ -1.66
Col6a4A2AX52 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC4.66□□□□□ -1.66
Col6a4A2AX52 Gm33952-201ENSMUST00000197795 408 ntBASIC4.66□□□□□ -1.66
Col6a4A2AX52 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC4.66□□□□□ -1.66
Col6a4A2AX52 Gm6719-201ENSMUST00000202067 335 ntBASIC4.66□□□□□ -1.66
Col6a4A2AX52 Gm4290-201ENSMUST00000206897 814 ntBASIC4.66□□□□□ -1.66
Col6a4A2AX52 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC4.66□□□□□ -1.66
Col6a4A2AX52 Gm7688-201ENSMUST00000212857 337 ntBASIC4.66□□□□□ -1.66
Col6a4A2AX52 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC4.66□□□□□ -1.66
Col6a4A2AX52 Gm21041-201ENSMUST00000214829 823 ntBASIC4.66□□□□□ -1.66
Col6a4A2AX52 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Col6a4A2AX52 Gm44697-201ENSMUST00000207756 1679 ntBASIC4.65□□□□□ -1.66
Col6a4A2AX52 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
Col6a4A2AX52 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Col6a4A2AX52 AC131329.1-201ENSMUST00000221204 3487 ntBASIC4.65□□□□□ -1.66
Col6a4A2AX52 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Col6a4A2AX52 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC4.65□□□□□ -1.66
Col6a4A2AX52 Gm15186-201ENSMUST00000119345 563 ntBASIC4.65□□□□□ -1.66
Col6a4A2AX52 St8sia3os-201ENSMUST00000123473 652 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Col6a4A2AX52 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC4.65□□□□□ -1.66
Col6a4A2AX52 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Col6a4A2AX52 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC4.65□□□□□ -1.66
Col6a4A2AX52 Gm23872-201ENSMUST00000175432 77 ntBASIC4.65□□□□□ -1.66
Col6a4A2AX52 7630403G23Rik-201ENSMUST00000184229 1084 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
Col6a4A2AX52 Gm28075-201ENSMUST00000189179 354 ntTSL 3 BASIC4.65□□□□□ -1.66
Col6a4A2AX52 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC4.65□□□□□ -1.66
Col6a4A2AX52 Gm2053-201ENSMUST00000195671 631 ntBASIC4.65□□□□□ -1.66
Col6a4A2AX52 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC4.65□□□□□ -1.66
Col6a4A2AX52 Gm22826-201ENSMUST00000083774 165 ntBASIC4.65□□□□□ -1.66
Col6a4A2AX52 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
Col6a4A2AX52 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.67
Col6a4A2AX52 Gm37174-201ENSMUST00000194699 3058 ntBASIC4.65□□□□□ -1.67
Col6a4A2AX52 AC152944.1-201ENSMUST00000220160 3101 ntBASIC4.65□□□□□ -1.67
Col6a4A2AX52 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Col6a4A2AX52 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Col6a4A2AX52 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Col6a4A2AX52 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Col6a4A2AX52 AC121870.1-201ENSMUST00000216279 4879 ntBASIC4.65□□□□□ -1.67
Col6a4A2AX52 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
Col6a4A2AX52 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Col6a4A2AX52 Gm3267-201ENSMUST00000118671 473 ntBASIC4.64□□□□□ -1.67
Col6a4A2AX52 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC4.64□□□□□ -1.67
Col6a4A2AX52 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col6a4A2AX52 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Col6a4A2AX52 Gm20523-201ENSMUST00000174340 1124 ntBASIC4.64□□□□□ -1.67
Col6a4A2AX52 Gm23945-201ENSMUST00000179609 92 ntBASIC4.64□□□□□ -1.67
Col6a4A2AX52 Gm19585-202ENSMUST00000191539 327 ntTSL 3 BASIC4.64□□□□□ -1.67
Col6a4A2AX52 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Col6a4A2AX52 Gm37710-201ENSMUST00000193501 1274 ntBASIC4.64□□□□□ -1.67
Col6a4A2AX52 Gm37381-202ENSMUST00000194643 657 ntTSL 3 BASIC4.64□□□□□ -1.67
Col6a4A2AX52 Gm44776-201ENSMUST00000207212 381 ntBASIC4.64□□□□□ -1.67
Col6a4A2AX52 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Col6a4A2AX52 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Col6a4A2AX52 Gm18541-201ENSMUST00000215935 538 ntBASIC4.64□□□□□ -1.67
Col6a4A2AX52 AC091783.3-201ENSMUST00000223969 681 ntBASIC4.64□□□□□ -1.67
Col6a4A2AX52 Ap3m1-208ENSMUST00000224016 764 ntBASIC4.64□□□□□ -1.67
Col6a4A2AX52 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Col6a4A2AX52 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC4.64□□□□□ -1.67
Col6a4A2AX52 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms