Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Scn3aA2ASI5 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Scn3aA2ASI5 C2cd3-202ENSMUST00000098259 6602 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Scn3aA2ASI5 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Scn3aA2ASI5 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Scn3aA2ASI5 Zfhx3-204ENSMUST00000220518 17152 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Scn3aA2ASI5 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC6.12□□□□□ -1.43
Scn3aA2ASI5 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Scn3aA2ASI5 Gm9038-201ENSMUST00000203400 604 ntBASIC6.12□□□□□ -1.43
Scn3aA2ASI5 Gm18127-201ENSMUST00000208479 725 ntBASIC6.12□□□□□ -1.43
Scn3aA2ASI5 Olfr563-ps1-201ENSMUST00000210909 873 ntBASIC6.12□□□□□ -1.43
Scn3aA2ASI5 Gm45422-201ENSMUST00000211476 246 ntBASIC6.12□□□□□ -1.43
Scn3aA2ASI5 AC154450.1-201ENSMUST00000220911 485 ntBASIC6.12□□□□□ -1.43
Scn3aA2ASI5 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Scn3aA2ASI5 Gm23508-201ENSMUST00000083079 72 ntBASIC6.12□□□□□ -1.43
Scn3aA2ASI5 Gm25139-201ENSMUST00000083247 210 ntBASIC6.12□□□□□ -1.43
Scn3aA2ASI5 Vmn2r109-201ENSMUST00000167093 2577 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Scn3aA2ASI5 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Scn3aA2ASI5 A730004F24Rik-202ENSMUST00000195454 1704 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Scn3aA2ASI5 Gm42508-201ENSMUST00000199972 3292 ntBASIC6.12□□□□□ -1.43
Scn3aA2ASI5 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Scn3aA2ASI5 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Scn3aA2ASI5 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Scn3aA2ASI5 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Scn3aA2ASI5 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Scn3aA2ASI5 G6pd2-201ENSMUST00000053876 2348 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Scn3aA2ASI5 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Scn3aA2ASI5 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Scn3aA2ASI5 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Scn3aA2ASI5 Cyp2c68-201ENSMUST00000099472 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Scn3aA2ASI5 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Scn3aA2ASI5 n-R5s24-201ENSMUST00000122518 117 ntBASIC6.11□□□□□ -1.43
Scn3aA2ASI5 Gm15589-201ENSMUST00000144193 271 ntTSL 3 BASIC6.11□□□□□ -1.43
Scn3aA2ASI5 Gm22529-201ENSMUST00000158817 123 ntBASIC6.11□□□□□ -1.43
Scn3aA2ASI5 Gm17086-201ENSMUST00000171346 484 ntBASIC6.11□□□□□ -1.43
Scn3aA2ASI5 Gm6223-201ENSMUST00000178436 871 ntBASIC6.11□□□□□ -1.43
Scn3aA2ASI5 Gm26731-201ENSMUST00000180683 543 ntBASIC6.11□□□□□ -1.43
Scn3aA2ASI5 Gm27543-201ENSMUST00000183562 177 ntBASIC6.11□□□□□ -1.43
Scn3aA2ASI5 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC6.11□□□□□ -1.43
Scn3aA2ASI5 Gm33952-201ENSMUST00000197795 408 ntBASIC6.11□□□□□ -1.43
Scn3aA2ASI5 Gm43768-201ENSMUST00000198380 1258 ntBASIC6.11□□□□□ -1.43
Scn3aA2ASI5 Gm44330-201ENSMUST00000200106 143 ntBASIC6.11□□□□□ -1.43
Scn3aA2ASI5 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC6.11□□□□□ -1.43
Scn3aA2ASI5 AC121947.1-201ENSMUST00000221755 1145 ntBASIC6.11□□□□□ -1.43
Scn3aA2ASI5 Olfr655-201ENSMUST00000057385 927 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Scn3aA2ASI5 Orm3-201ENSMUST00000006687 773 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Scn3aA2ASI5 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Scn3aA2ASI5 Gm44801-201ENSMUST00000207644 2060 ntBASIC6.11□□□□□ -1.43
Scn3aA2ASI5 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Scn3aA2ASI5 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Scn3aA2ASI5 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Scn3aA2ASI5 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Scn3aA2ASI5 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Scn3aA2ASI5 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Scn3aA2ASI5 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC6.11□□□□□ -1.43
Scn3aA2ASI5 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Scn3aA2ASI5 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Scn3aA2ASI5 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Scn3aA2ASI5 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Scn3aA2ASI5 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC6.11□□□□□ -1.43
Scn3aA2ASI5 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Scn3aA2ASI5 Gm11550-201ENSMUST00000118210 699 ntBASIC6.11□□□□□ -1.43
Scn3aA2ASI5 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC6.11□□□□□ -1.43
Scn3aA2ASI5 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
Scn3aA2ASI5 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Scn3aA2ASI5 Gm44134-202ENSMUST00000204777 545 ntBASIC6.11□□□□□ -1.43
Scn3aA2ASI5 Gm18599-201ENSMUST00000206729 1125 ntBASIC6.11□□□□□ -1.43
Scn3aA2ASI5 Gm40692-201ENSMUST00000220411 491 ntBASIC6.11□□□□□ -1.43
Scn3aA2ASI5 AC154851.1-201ENSMUST00000221591 655 ntBASIC6.11□□□□□ -1.43
Scn3aA2ASI5 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC6.11□□□□□ -1.43
Scn3aA2ASI5 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
Scn3aA2ASI5 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Scn3aA2ASI5 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Scn3aA2ASI5 Rsf1os2-202ENSMUST00000147690 3091 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Scn3aA2ASI5 Gm7919-201ENSMUST00000202043 1389 ntBASIC6.1□□□□□ -1.43
Scn3aA2ASI5 Trrap-201ENSMUST00000038980 12344 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
Scn3aA2ASI5 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Scn3aA2ASI5 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Scn3aA2ASI5 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Scn3aA2ASI5 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Scn3aA2ASI5 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC6.1□□□□□ -1.43
Scn3aA2ASI5 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Scn3aA2ASI5 Gm42994-201ENSMUST00000195964 2549 ntBASIC6.1□□□□□ -1.43
Scn3aA2ASI5 Gm23294-201ENSMUST00000104150 164 ntBASIC6.1□□□□□ -1.43
Scn3aA2ASI5 Gm15803-201ENSMUST00000120118 394 ntBASIC6.1□□□□□ -1.43
Scn3aA2ASI5 Gm13738-201ENSMUST00000122437 469 ntBASIC6.1□□□□□ -1.43
Scn3aA2ASI5 Gm25603-201ENSMUST00000158361 105 ntBASIC6.1□□□□□ -1.43
Scn3aA2ASI5 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Scn3aA2ASI5 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Scn3aA2ASI5 Mir6516-201ENSMUST00000196236 110 ntBASIC6.1□□□□□ -1.43
Scn3aA2ASI5 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC6.1□□□□□ -1.43
Scn3aA2ASI5 Gm8291-201ENSMUST00000209635 1261 ntBASIC6.1□□□□□ -1.43
Scn3aA2ASI5 AC134537.2-201ENSMUST00000217770 575 ntBASIC6.1□□□□□ -1.43
Scn3aA2ASI5 AC154755.1-201ENSMUST00000225244 537 ntBASIC6.1□□□□□ -1.43
Scn3aA2ASI5 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Scn3aA2ASI5 Olfr591-201ENSMUST00000074272 945 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Scn3aA2ASI5 Rpl21-ps6-201ENSMUST00000074828 468 ntBASIC6.1□□□□□ -1.43
Scn3aA2ASI5 Serpinb6b-202ENSMUST00000110293 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Scn3aA2ASI5 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Scn3aA2ASI5 Gm44424-201ENSMUST00000203438 1826 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms