Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Smc1aQ9CU62 Gm14783-201ENSMUST00000118900 663 ntBASIC6.35□□□□□ -1.39
Smc1aQ9CU62 Gm12731-201ENSMUST00000120932 268 ntBASIC6.35□□□□□ -1.39
Smc1aQ9CU62 Gm13899-201ENSMUST00000121519 1255 ntBASIC6.35□□□□□ -1.39
Smc1aQ9CU62 Gm15840-201ENSMUST00000122099 943 ntBASIC6.35□□□□□ -1.39
Smc1aQ9CU62 Gm15335-201ENSMUST00000122442 411 ntBASIC6.35□□□□□ -1.39
Smc1aQ9CU62 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Smc1aQ9CU62 Gm14349-201ENSMUST00000137155 902 ntBASIC6.35□□□□□ -1.39
Smc1aQ9CU62 Gm26372-201ENSMUST00000157831 236 ntBASIC6.35□□□□□ -1.39
Smc1aQ9CU62 Gm23280-201ENSMUST00000157905 139 ntBASIC6.35□□□□□ -1.39
Smc1aQ9CU62 Gm23224-201ENSMUST00000158122 271 ntBASIC6.35□□□□□ -1.39
Smc1aQ9CU62 Gm24767-201ENSMUST00000158509 95 ntBASIC6.35□□□□□ -1.39
Smc1aQ9CU62 Gm8185-201ENSMUST00000160999 669 ntBASIC6.35□□□□□ -1.39
Smc1aQ9CU62 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Smc1aQ9CU62 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Smc1aQ9CU62 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC6.35□□□□□ -1.39
Smc1aQ9CU62 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC6.35□□□□□ -1.39
Smc1aQ9CU62 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC6.35□□□□□ -1.39
Smc1aQ9CU62 Gm29551-201ENSMUST00000190913 698 ntBASIC6.35□□□□□ -1.39
Smc1aQ9CU62 Gm44316-201ENSMUST00000199274 97 ntBASIC6.35□□□□□ -1.39
Smc1aQ9CU62 Gm6649-201ENSMUST00000199743 1165 ntBASIC6.35□□□□□ -1.39
Smc1aQ9CU62 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC6.35□□□□□ -1.39
Smc1aQ9CU62 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Smc1aQ9CU62 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC6.35□□□□□ -1.39
Smc1aQ9CU62 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC6.35□□□□□ -1.39
Smc1aQ9CU62 CU062626.1-201ENSMUST00000225248 505 ntBASIC6.35□□□□□ -1.39
Smc1aQ9CU62 Snora30-201ENSMUST00000083325 130 ntBASIC6.35□□□□□ -1.39
Smc1aQ9CU62 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Smc1aQ9CU62 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC6.35□□□□□ -1.39
Smc1aQ9CU62 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
Smc1aQ9CU62 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC6.35□□□□□ -1.39
Smc1aQ9CU62 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
Smc1aQ9CU62 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Smc1aQ9CU62 AC124516.1-201ENSMUST00000221845 3544 ntBASIC6.35□□□□□ -1.39
Smc1aQ9CU62 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Smc1aQ9CU62 AW046200-203ENSMUST00000211787 2479 ntBASIC6.35□□□□□ -1.39
Smc1aQ9CU62 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Smc1aQ9CU62 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Smc1aQ9CU62 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Smc1aQ9CU62 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Smc1aQ9CU62 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Smc1aQ9CU62 Gm19514-201ENSMUST00000206856 4489 ntBASIC6.35□□□□□ -1.39
Smc1aQ9CU62 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Smc1aQ9CU62 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Smc1aQ9CU62 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Smc1aQ9CU62 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Smc1aQ9CU62 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC6.34□□□□□ -1.39
Smc1aQ9CU62 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Smc1aQ9CU62 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC6.34□□□□□ -1.39
Smc1aQ9CU62 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Smc1aQ9CU62 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Smc1aQ9CU62 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC6.34□□□□□ -1.39
Smc1aQ9CU62 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC6.34□□□□□ -1.39
Smc1aQ9CU62 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Smc1aQ9CU62 Mageb16-ps1-201ENSMUST00000117991 1127 ntBASIC6.34□□□□□ -1.39
Smc1aQ9CU62 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC6.34□□□□□ -1.39
Smc1aQ9CU62 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC6.34□□□□□ -1.39
Smc1aQ9CU62 Gm22529-201ENSMUST00000158817 123 ntBASIC6.34□□□□□ -1.39
Smc1aQ9CU62 Vmn1r123-201ENSMUST00000166948 924 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Smc1aQ9CU62 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC6.34□□□□□ -1.39
Smc1aQ9CU62 Gm20480-201ENSMUST00000173953 250 ntBASIC6.34□□□□□ -1.39
Smc1aQ9CU62 Gm23631-201ENSMUST00000175291 123 ntBASIC6.34□□□□□ -1.39
Smc1aQ9CU62 Rps12-ps21-201ENSMUST00000178172 402 ntBASIC6.34□□□□□ -1.39
Smc1aQ9CU62 Gm2877-201ENSMUST00000178248 1204 ntBASIC6.34□□□□□ -1.39
Smc1aQ9CU62 Gm8324-201ENSMUST00000178911 1204 ntBASIC6.34□□□□□ -1.39
Smc1aQ9CU62 Gm18865-201ENSMUST00000193011 1171 ntBASIC6.34□□□□□ -1.39
Smc1aQ9CU62 Gm37004-201ENSMUST00000193021 683 ntTSL 5 BASIC6.34□□□□□ -1.39
Smc1aQ9CU62 Gm19231-201ENSMUST00000193212 830 ntBASIC6.34□□□□□ -1.39
Smc1aQ9CU62 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Smc1aQ9CU62 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC6.34□□□□□ -1.39
Smc1aQ9CU62 Gm29736-201ENSMUST00000198189 385 ntBASIC6.34□□□□□ -1.39
Smc1aQ9CU62 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC6.34□□□□□ -1.39
Smc1aQ9CU62 Gm18510-201ENSMUST00000219335 1096 ntBASIC6.34□□□□□ -1.39
Smc1aQ9CU62 AC118230.1-201ENSMUST00000220196 656 ntBASIC6.34□□□□□ -1.39
Smc1aQ9CU62 AC154450.1-201ENSMUST00000220911 485 ntBASIC6.34□□□□□ -1.39
Smc1aQ9CU62 CT030170.4-202ENSMUST00000221109 540 ntBASIC6.34□□□□□ -1.39
Smc1aQ9CU62 AC124826.1-201ENSMUST00000221651 325 ntBASIC6.34□□□□□ -1.39
Smc1aQ9CU62 Gm6068-201ENSMUST00000222270 387 ntBASIC6.34□□□□□ -1.39
Smc1aQ9CU62 AC154583.1-201ENSMUST00000224788 655 ntBASIC6.34□□□□□ -1.39
Smc1aQ9CU62 CT025686.1-201ENSMUST00000227592 438 ntBASIC6.34□□□□□ -1.39
Smc1aQ9CU62 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Smc1aQ9CU62 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Smc1aQ9CU62 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC6.34□□□□□ -1.39
Smc1aQ9CU62 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Smc1aQ9CU62 Muc15-203ENSMUST00000111017 3095 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Smc1aQ9CU62 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Smc1aQ9CU62 Zpld1-202ENSMUST00000143914 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Smc1aQ9CU62 Kynu-203ENSMUST00000112826 1587 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Smc1aQ9CU62 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Smc1aQ9CU62 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Smc1aQ9CU62 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC6.34□□□□□ -1.39
Smc1aQ9CU62 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Smc1aQ9CU62 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Smc1aQ9CU62 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
Smc1aQ9CU62 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Smc1aQ9CU62 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Smc1aQ9CU62 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Smc1aQ9CU62 AC154627.2-201ENSMUST00000227028 4669 ntBASIC6.34□□□□□ -1.4
Smc1aQ9CU62 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC6.33□□□□□ -1.4
Smc1aQ9CU62 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms