Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 LOC665443-201ENSMUST00000212284 796 ntBASIC4.84□□□□□ -1.63
Sft2d3Q9CSV6 AC158630.1-201ENSMUST00000214387 993 ntTSL 5 BASIC4.84□□□□□ -1.63
Sft2d3Q9CSV6 AC123832.2-201ENSMUST00000215151 129 ntBASIC4.84□□□□□ -1.63
Sft2d3Q9CSV6 AC073947.1-201ENSMUST00000216991 649 ntBASIC4.84□□□□□ -1.63
Sft2d3Q9CSV6 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Sft2d3Q9CSV6 Gm18510-201ENSMUST00000219335 1096 ntBASIC4.84□□□□□ -1.63
Sft2d3Q9CSV6 Gm19186-201ENSMUST00000219922 333 ntBASIC4.84□□□□□ -1.63
Sft2d3Q9CSV6 AC134254.2-201ENSMUST00000221262 170 ntBASIC4.84□□□□□ -1.63
Sft2d3Q9CSV6 Gm11360-201ENSMUST00000221898 262 ntBASIC4.84□□□□□ -1.63
Sft2d3Q9CSV6 AC154556.1-201ENSMUST00000224587 885 ntBASIC4.84□□□□□ -1.63
Sft2d3Q9CSV6 3830408C21Rik-204ENSMUST00000224838 714 ntBASIC4.84□□□□□ -1.63
Sft2d3Q9CSV6 AC107711.2-203ENSMUST00000227827 762 ntBASIC4.84□□□□□ -1.63
Sft2d3Q9CSV6 Ssxb2-201ENSMUST00000023931 927 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
Sft2d3Q9CSV6 Ceacam12-201ENSMUST00000032520 1056 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
Sft2d3Q9CSV6 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Sft2d3Q9CSV6 Gm23737-201ENSMUST00000082547 159 ntBASIC4.84□□□□□ -1.63
Sft2d3Q9CSV6 Gm17165-201ENSMUST00000096155 493 ntBASIC4.84□□□□□ -1.63
Sft2d3Q9CSV6 Olfr1181-201ENSMUST00000099823 936 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Sft2d3Q9CSV6 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Sft2d3Q9CSV6 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Sft2d3Q9CSV6 Gm43887-201ENSMUST00000204727 3186 ntBASIC4.84□□□□□ -1.63
Sft2d3Q9CSV6 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
Sft2d3Q9CSV6 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Sft2d3Q9CSV6 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC4.84□□□□□ -1.64
Sft2d3Q9CSV6 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.64
Sft2d3Q9CSV6 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
Sft2d3Q9CSV6 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Sft2d3Q9CSV6 Gm38264-201ENSMUST00000194850 2032 ntBASIC4.84□□□□□ -1.64
Sft2d3Q9CSV6 Kif18a-201ENSMUST00000028527 3369 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Sft2d3Q9CSV6 Mug2-201ENSMUST00000081777 4579 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Sft2d3Q9CSV6 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Sft2d3Q9CSV6 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Mboat2-204ENSMUST00000221952 6792 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Tlr1-201ENSMUST00000059349 2783 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 AC153729.4-201ENSMUST00000217582 3826 ntBASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Ralgapa2-202ENSMUST00000109986 11030 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 4833421K07Rik-201ENSMUST00000206146 1391 ntBASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 AC122357.3-201ENSMUST00000221260 2293 ntBASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Igkv5-37-201ENSMUST00000103372 359 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Gm14335-201ENSMUST00000119165 810 ntBASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Gm12322-201ENSMUST00000121605 389 ntBASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 1700048M11Rik-201ENSMUST00000132861 485 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Gm16086-201ENSMUST00000143652 371 ntTSL 3 BASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Gm23082-201ENSMUST00000157852 133 ntBASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Gm23224-201ENSMUST00000158122 271 ntBASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Gm23631-201ENSMUST00000175291 123 ntBASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Gm29124-201ENSMUST00000186576 452 ntBASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Gm8581-201ENSMUST00000188636 890 ntBASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Gm37517-201ENSMUST00000194004 1289 ntBASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Gm5554-201ENSMUST00000199726 1206 ntBASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Gm7181-201ENSMUST00000202197 434 ntBASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Gm4602-201ENSMUST00000203198 308 ntBASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Gm44607-201ENSMUST00000205611 1090 ntBASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Api5-ps-201ENSMUST00000206607 577 ntBASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Gm45722-201ENSMUST00000213075 466 ntBASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 AC153505.2-201ENSMUST00000217741 277 ntBASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 CT030170.4-202ENSMUST00000221109 540 ntBASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 AC168056.2-201ENSMUST00000223591 269 ntBASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Ppih-201ENSMUST00000056458 757 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Olfr934-201ENSMUST00000074211 933 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 n-R5s69-201ENSMUST00000083872 119 ntBASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Gm43466-201ENSMUST00000197836 5214 ntBASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Vmn1r36-201ENSMUST00000226142 1770 ntAPPRIS ALT2 BASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sft2d3Q9CSV6 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Sft2d3Q9CSV6 AC162908.1-201ENSMUST00000219164 4563 ntBASIC4.82□□□□□ -1.64
Sft2d3Q9CSV6 Gm16070-202ENSMUST00000149914 2146 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Sft2d3Q9CSV6 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC4.82□□□□□ -1.64
Sft2d3Q9CSV6 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Sft2d3Q9CSV6 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC4.82□□□□□ -1.64
Sft2d3Q9CSV6 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Sft2d3Q9CSV6 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Sft2d3Q9CSV6 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
Sft2d3Q9CSV6 Gm12051-201ENSMUST00000147771 1341 ntTSL 5 BASIC4.82□□□□□ -1.64
Sft2d3Q9CSV6 Rspry1-205ENSMUST00000211983 3397 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms