Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm6664-201ENSMUST00000119138 468 ntBASIC7.16□□□□□ -1.26
Clp1Q99LI9 Gm7058-201ENSMUST00000119209 902 ntBASIC7.16□□□□□ -1.26
Clp1Q99LI9 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC7.16□□□□□ -1.26
Clp1Q99LI9 Gm25782-201ENSMUST00000122526 289 ntBASIC7.16□□□□□ -1.26
Clp1Q99LI9 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC7.16□□□□□ -1.26
Clp1Q99LI9 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC7.16□□□□□ -1.26
Clp1Q99LI9 Gm15257-201ENSMUST00000177680 883 ntBASIC7.16□□□□□ -1.26
Clp1Q99LI9 Gm15252-201ENSMUST00000177750 883 ntBASIC7.16□□□□□ -1.26
Clp1Q99LI9 Gm23269-201ENSMUST00000178701 107 ntBASIC7.16□□□□□ -1.26
Clp1Q99LI9 Gm15260-201ENSMUST00000179402 883 ntBASIC7.16□□□□□ -1.26
Clp1Q99LI9 Mir7669-201ENSMUST00000183442 58 ntBASIC7.16□□□□□ -1.26
Clp1Q99LI9 Mir6971-201ENSMUST00000183497 63 ntBASIC7.16□□□□□ -1.26
Clp1Q99LI9 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC7.16□□□□□ -1.26
Clp1Q99LI9 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC7.16□□□□□ -1.26
Clp1Q99LI9 Gm37719-201ENSMUST00000194615 292 ntBASIC7.16□□□□□ -1.26
Clp1Q99LI9 Gm36939-201ENSMUST00000194889 439 ntBASIC7.16□□□□□ -1.26
Clp1Q99LI9 Gm7270-201ENSMUST00000195818 1128 ntBASIC7.16□□□□□ -1.26
Clp1Q99LI9 Gm44361-201ENSMUST00000197960 94 ntBASIC7.16□□□□□ -1.26
Clp1Q99LI9 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC7.16□□□□□ -1.26
Clp1Q99LI9 Gm45122-201ENSMUST00000206376 784 ntBASIC7.16□□□□□ -1.26
Clp1Q99LI9 Gm6070-201ENSMUST00000207275 419 ntBASIC7.16□□□□□ -1.26
Clp1Q99LI9 Gm45448-201ENSMUST00000211739 209 ntBASIC7.16□□□□□ -1.26
Clp1Q99LI9 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC7.16□□□□□ -1.26
Clp1Q99LI9 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Clp1Q99LI9 AC102603.1-201ENSMUST00000227481 584 ntBASIC7.16□□□□□ -1.26
Clp1Q99LI9 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Clp1Q99LI9 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC7.16□□□□□ -1.26
Clp1Q99LI9 Prl3d3-201ENSMUST00000073601 856 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Clp1Q99LI9 Rpl35a-ps7-201ENSMUST00000080603 333 ntBASIC7.16□□□□□ -1.26
Clp1Q99LI9 Mir325-201ENSMUST00000083491 98 ntBASIC7.16□□□□□ -1.26
Clp1Q99LI9 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Clp1Q99LI9 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Clp1Q99LI9 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Clp1Q99LI9 Tph1-201ENSMUST00000049298 4562 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Clp1Q99LI9 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC7.16□□□□□ -1.26
Clp1Q99LI9 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Clp1Q99LI9 Gm18716-201ENSMUST00000204507 1603 ntBASIC7.16□□□□□ -1.26
Clp1Q99LI9 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Clp1Q99LI9 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Clp1Q99LI9 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Clp1Q99LI9 Olfr1426-205ENSMUST00000219155 2503 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Clp1Q99LI9 Vmn1r40-203ENSMUST00000227669 2540 ntBASIC7.16□□□□□ -1.26
Clp1Q99LI9 Gm37107-201ENSMUST00000195326 2552 ntBASIC7.15□□□□□ -1.26
Clp1Q99LI9 Gm12608-201ENSMUST00000122013 1715 ntBASIC7.15□□□□□ -1.26
Clp1Q99LI9 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
Clp1Q99LI9 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Clp1Q99LI9 Rassf6-201ENSMUST00000031317 1958 ntAPPRIS P3 TSL 5 BASIC7.15□□□□□ -1.26
Clp1Q99LI9 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Clp1Q99LI9 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Clp1Q99LI9 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC7.15□□□□□ -1.26
Clp1Q99LI9 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC7.15□□□□□ -1.26
Clp1Q99LI9 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC7.15□□□□□ -1.26
Clp1Q99LI9 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Clp1Q99LI9 Spaca7-201ENSMUST00000010579 762 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Clp1Q99LI9 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC7.15□□□□□ -1.26
Clp1Q99LI9 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC7.15□□□□□ -1.26
Clp1Q99LI9 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC7.15□□□□□ -1.26
Clp1Q99LI9 Gm12082-201ENSMUST00000138164 600 ntTSL 3 BASIC7.15□□□□□ -1.26
Clp1Q99LI9 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC7.15□□□□□ -1.26
Clp1Q99LI9 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC7.15□□□□□ -1.26
Clp1Q99LI9 Gm26352-201ENSMUST00000158223 125 ntBASIC7.15□□□□□ -1.26
Clp1Q99LI9 Gm24875-201ENSMUST00000158888 104 ntBASIC7.15□□□□□ -1.26
Clp1Q99LI9 Gm3076-201ENSMUST00000161613 451 ntBASIC7.15□□□□□ -1.26
Clp1Q99LI9 Gm8256-201ENSMUST00000169178 453 ntBASIC7.15□□□□□ -1.26
Clp1Q99LI9 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC7.15□□□□□ -1.26
Clp1Q99LI9 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Clp1Q99LI9 Gm20691-201ENSMUST00000176889 333 ntBASIC7.15□□□□□ -1.26
Clp1Q99LI9 Otx2os1-201ENSMUST00000183522 866 ntTSL 3 BASIC7.15□□□□□ -1.26
Clp1Q99LI9 Mir6348-201ENSMUST00000183804 120 ntBASIC7.15□□□□□ -1.26
Clp1Q99LI9 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC7.15□□□□□ -1.26
Clp1Q99LI9 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC7.15□□□□□ -1.26
Clp1Q99LI9 Gm28973-201ENSMUST00000189310 613 ntBASIC7.15□□□□□ -1.26
Clp1Q99LI9 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Clp1Q99LI9 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC7.15□□□□□ -1.26
Clp1Q99LI9 Ass-ps1-201ENSMUST00000197717 761 ntBASIC7.15□□□□□ -1.26
Clp1Q99LI9 Gm8930-201ENSMUST00000201693 768 ntBASIC7.15□□□□□ -1.26
Clp1Q99LI9 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Clp1Q99LI9 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC7.15□□□□□ -1.26
Clp1Q99LI9 Gm46192-201ENSMUST00000217894 326 ntBASIC7.15□□□□□ -1.26
Clp1Q99LI9 AC152951.1-201ENSMUST00000218907 266 ntBASIC7.15□□□□□ -1.26
Clp1Q99LI9 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC7.15□□□□□ -1.26
Clp1Q99LI9 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC7.15□□□□□ -1.26
Clp1Q99LI9 Gm5176-202ENSMUST00000220267 583 ntBASIC7.15□□□□□ -1.26
Clp1Q99LI9 CT009515.3-201ENSMUST00000226509 671 ntBASIC7.15□□□□□ -1.26
Clp1Q99LI9 Sprr2j-ps-201ENSMUST00000029533 678 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Clp1Q99LI9 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Clp1Q99LI9 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Clp1Q99LI9 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Clp1Q99LI9 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Clp1Q99LI9 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Clp1Q99LI9 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Clp1Q99LI9 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Clp1Q99LI9 Olfr531-204ENSMUST00000217167 3874 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Clp1Q99LI9 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Clp1Q99LI9 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Clp1Q99LI9 Gm45537-201ENSMUST00000211539 2708 ntBASIC7.15□□□□□ -1.26
Clp1Q99LI9 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC7.15□□□□□ -1.26
Clp1Q99LI9 Tek-201ENSMUST00000071168 4176 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Clp1Q99LI9 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Clp1Q99LI9 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms