Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 AC124687.5-201ENSMUST00000222734 596 ntTSL 5 BASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 AC102676.1-201ENSMUST00000228131 719 ntBASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 Gm2223-201ENSMUST00000112099 1350 ntBASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 Skint10-201ENSMUST00000060327 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 Gm45644-201ENSMUST00000210255 2740 ntBASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Ccdc28bQ8CEG5 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Gm43283-201ENSMUST00000199138 2548 ntBASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Gm43567-201ENSMUST00000197581 1978 ntBASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Gm38451-201ENSMUST00000208329 2646 ntBASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Gm14743-201ENSMUST00000114026 759 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Gm649-201ENSMUST00000117284 1054 ntBASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Gm11472-201ENSMUST00000121305 556 ntBASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Gm12438-201ENSMUST00000122034 336 ntBASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Gm26106-201ENSMUST00000157254 228 ntBASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Gm26350-201ENSMUST00000157531 288 ntBASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Gm25227-201ENSMUST00000158204 112 ntBASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Gm6434-201ENSMUST00000163316 372 ntBASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Gm21999-201ENSMUST00000165985 387 ntBASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Gm17711-201ENSMUST00000172028 237 ntBASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Gm28387-201ENSMUST00000189245 854 ntTSL 3 BASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 7530428D23Rik-201ENSMUST00000191725 765 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Gm37629-201ENSMUST00000193635 1050 ntBASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Gm37490-201ENSMUST00000195566 724 ntBASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Gm8479-201ENSMUST00000203825 718 ntBASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Gm44796-201ENSMUST00000205272 626 ntTSL 2 BASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 AC134439.2-201ENSMUST00000221950 467 ntBASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Mup13-201ENSMUST00000072678 925 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Gm23511-201ENSMUST00000083084 164 ntBASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Gm19301-201ENSMUST00000174283 2210 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Gm37509-201ENSMUST00000194867 3169 ntBASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Angel2-201ENSMUST00000027947 3562 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Kcnma1-204ENSMUST00000112423 3664 ntTSL 5 BASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Pja2-203ENSMUST00000172733 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC5.49□□□□□ -1.53
Ccdc28bQ8CEG5 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc28bQ8CEG5 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
Ccdc28bQ8CEG5 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Ccdc28bQ8CEG5 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.48□□□□□ -1.53
Ccdc28bQ8CEG5 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Ccdc28bQ8CEG5 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.48□□□□□ -1.53
Ccdc28bQ8CEG5 Olfr3-201ENSMUST00000100151 942 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Ccdc28bQ8CEG5 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc28bQ8CEG5 Gm14863-201ENSMUST00000119648 307 ntBASIC5.48□□□□□ -1.53
Ccdc28bQ8CEG5 Gm16016-201ENSMUST00000120831 550 ntBASIC5.48□□□□□ -1.53
Ccdc28bQ8CEG5 Gm12369-201ENSMUST00000121343 942 ntBASIC5.48□□□□□ -1.53
Ccdc28bQ8CEG5 Gm15237-201ENSMUST00000122104 469 ntBASIC5.48□□□□□ -1.53
Ccdc28bQ8CEG5 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc28bQ8CEG5 Gm12602-202ENSMUST00000154352 707 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc28bQ8CEG5 Gm23069-201ENSMUST00000158240 311 ntBASIC5.48□□□□□ -1.53
Ccdc28bQ8CEG5 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc28bQ8CEG5 Dynlt1a-201ENSMUST00000169415 742 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc28bQ8CEG5 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Ccdc28bQ8CEG5 Gm27185-201ENSMUST00000184296 247 ntBASIC5.48□□□□□ -1.53
Ccdc28bQ8CEG5 Gm27617-201ENSMUST00000184321 168 ntBASIC5.48□□□□□ -1.53
Ccdc28bQ8CEG5 Gm6717-201ENSMUST00000185549 838 ntBASIC5.48□□□□□ -1.53
Ccdc28bQ8CEG5 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC5.48□□□□□ -1.53
Ccdc28bQ8CEG5 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC5.48□□□□□ -1.53
Ccdc28bQ8CEG5 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC5.48□□□□□ -1.53
Ccdc28bQ8CEG5 Gm29206-201ENSMUST00000189321 827 ntTSL 5 BASIC5.48□□□□□ -1.53
Ccdc28bQ8CEG5 Gm43596-201ENSMUST00000202818 884 ntBASIC5.48□□□□□ -1.53
Ccdc28bQ8CEG5 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC5.48□□□□□ -1.53
Ccdc28bQ8CEG5 Gm31904-201ENSMUST00000219446 877 ntTSL 5 BASIC5.48□□□□□ -1.53
Ccdc28bQ8CEG5 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC5.48□□□□□ -1.53
Ccdc28bQ8CEG5 Gm7042-201ENSMUST00000223027 384 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms