Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
Lrif1Q8CDD9 Gm43055-201ENSMUST00000198859 879 ntTSL 3 BASIC5.5□□□□□ -1.53
Lrif1Q8CDD9 Gm31861-201ENSMUST00000204563 672 ntBASIC5.5□□□□□ -1.53
Lrif1Q8CDD9 Gm9278-201ENSMUST00000205508 553 ntBASIC5.5□□□□□ -1.53
Lrif1Q8CDD9 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC5.5□□□□□ -1.53
Lrif1Q8CDD9 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Lrif1Q8CDD9 AC158633.1-201ENSMUST00000219892 649 ntBASIC5.5□□□□□ -1.53
Lrif1Q8CDD9 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC5.5□□□□□ -1.53
Lrif1Q8CDD9 AC124709.3-201ENSMUST00000227294 171 ntBASIC5.5□□□□□ -1.53
Lrif1Q8CDD9 AC170810.1-201ENSMUST00000228267 672 ntBASIC5.5□□□□□ -1.53
Lrif1Q8CDD9 Snora44-201ENSMUST00000082670 129 ntBASIC5.5□□□□□ -1.53
Lrif1Q8CDD9 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC5.5□□□□□ -1.53
Lrif1Q8CDD9 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Lrif1Q8CDD9 Rlf-203ENSMUST00000168615 6585 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Lrif1Q8CDD9 Dennd4c-204ENSMUST00000142837 5870 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Lrif1Q8CDD9 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Lrif1Q8CDD9 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Lrif1Q8CDD9 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Lrif1Q8CDD9 Gm15011-201ENSMUST00000117724 1480 ntBASIC5.5□□□□□ -1.53
Lrif1Q8CDD9 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Lrif1Q8CDD9 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Lrif1Q8CDD9 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Lrif1Q8CDD9 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Dclre1a-204ENSMUST00000182276 4066 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Gm42662-201ENSMUST00000202539 1431 ntBASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 AC105407.2-201ENSMUST00000223707 3911 ntBASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Amd1-201ENSMUST00000099945 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Gm22370-201ENSMUST00000102422 83 ntBASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Gm14679-201ENSMUST00000121536 722 ntBASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Gm12301-201ENSMUST00000152963 523 ntTSL 2 BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Gm16260-201ENSMUST00000155141 304 ntBASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Gm26170-201ENSMUST00000158419 148 ntBASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Gm5087-203ENSMUST00000161835 814 ntTSL 2 BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Gm9597-201ENSMUST00000171913 602 ntBASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Gm23872-201ENSMUST00000175432 77 ntBASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Gm2058-201ENSMUST00000178791 560 ntBASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Gm21399-201ENSMUST00000180210 597 ntBASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Mir6516-201ENSMUST00000196236 110 ntBASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 AC171206.1-201ENSMUST00000213612 213 ntBASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 AC140409.4-201ENSMUST00000215757 538 ntBASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Gm4510-201ENSMUST00000218265 427 ntBASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Gm5087-204ENSMUST00000225820 645 ntBASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 AC113198.1-201ENSMUST00000226353 832 ntBASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Anxa10-202ENSMUST00000034054 1222 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Fam229b-201ENSMUST00000063204 745 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Gm23927-201ENSMUST00000082466 215 ntBASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Gm23502-201ENSMUST00000083902 145 ntBASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Tbpl2-201ENSMUST00000080453 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Obox7-203ENSMUST00000183788 1476 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 4933411O13Rik-201ENSMUST00000050665 1464 ntBASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Alkbh8-204ENSMUST00000211933 7674 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Lrif1Q8CDD9 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms