Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC6.94□□□□□ -1.3
Ccdc60Q8C4J0 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc60Q8C4J0 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc60Q8C4J0 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Ccdc60Q8C4J0 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Ccdc60Q8C4J0 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
Ccdc60Q8C4J0 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC6.94□□□□□ -1.3
Ccdc60Q8C4J0 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc60Q8C4J0 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc60Q8C4J0 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc60Q8C4J0 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc60Q8C4J0 Gm42436-201ENSMUST00000198804 3656 ntBASIC6.94□□□□□ -1.3
Ccdc60Q8C4J0 Tbc1d23-201ENSMUST00000023431 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
Ccdc60Q8C4J0 Abcc2-202ENSMUST00000099413 1926 ntBASIC6.93□□□□□ -1.3
Ccdc60Q8C4J0 Cx3cr1-201ENSMUST00000064165 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc60Q8C4J0 Gm37690-202ENSMUST00000192684 1497 ntTSL 5 BASIC6.93□□□□□ -1.3
Ccdc60Q8C4J0 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc60Q8C4J0 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc60Q8C4J0 Mup-ps28-201ENSMUST00000120686 289 ntBASIC6.93□□□□□ -1.3
Ccdc60Q8C4J0 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc60Q8C4J0 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc60Q8C4J0 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC6.93□□□□□ -1.3
Ccdc60Q8C4J0 4930519D14Rik-201ENSMUST00000151471 1137 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc60Q8C4J0 Gm24940-201ENSMUST00000158326 108 ntBASIC6.93□□□□□ -1.3
Ccdc60Q8C4J0 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC6.93□□□□□ -1.3
Ccdc60Q8C4J0 Gm17223-201ENSMUST00000171413 481 ntBASIC6.93□□□□□ -1.3
Ccdc60Q8C4J0 Gm4258-201ENSMUST00000182127 506 ntTSL 2 BASIC6.93□□□□□ -1.3
Ccdc60Q8C4J0 Mir6539-201ENSMUST00000183732 110 ntBASIC6.93□□□□□ -1.3
Ccdc60Q8C4J0 Gm19231-201ENSMUST00000193212 830 ntBASIC6.93□□□□□ -1.3
Ccdc60Q8C4J0 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc60Q8C4J0 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC6.93□□□□□ -1.3
Ccdc60Q8C4J0 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC6.93□□□□□ -1.3
Ccdc60Q8C4J0 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC6.93□□□□□ -1.3
Ccdc60Q8C4J0 Gm33178-201ENSMUST00000212090 257 ntBASIC6.93□□□□□ -1.3
Ccdc60Q8C4J0 1700092E16Rik-201ENSMUST00000214766 753 ntBASIC6.93□□□□□ -1.3
Ccdc60Q8C4J0 CT025665.1-201ENSMUST00000215251 1199 ntBASIC6.93□□□□□ -1.3
Ccdc60Q8C4J0 Gm46192-201ENSMUST00000217894 326 ntBASIC6.93□□□□□ -1.3
Ccdc60Q8C4J0 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC6.93□□□□□ -1.3
Ccdc60Q8C4J0 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC6.93□□□□□ -1.3
Ccdc60Q8C4J0 AC164164.2-201ENSMUST00000221809 785 ntBASIC6.93□□□□□ -1.3
Ccdc60Q8C4J0 9530014B07Rik-201ENSMUST00000221882 744 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc60Q8C4J0 Gm5374-202ENSMUST00000222910 314 ntBASIC6.93□□□□□ -1.3
Ccdc60Q8C4J0 AC192333.6-201ENSMUST00000224565 725 ntBASIC6.93□□□□□ -1.3
Ccdc60Q8C4J0 Mir129-1-201ENSMUST00000083535 73 ntBASIC6.93□□□□□ -1.3
Ccdc60Q8C4J0 Olfr878-201ENSMUST00000086061 1065 ntBASIC6.93□□□□□ -1.3
Ccdc60Q8C4J0 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Ccdc60Q8C4J0 Cr2-202ENSMUST00000082321 6207 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc60Q8C4J0 Rapgef6-201ENSMUST00000094536 3372 ntTSL 5 BASIC6.93□□□□□ -1.3
Ccdc60Q8C4J0 Kat6b-ps2-201ENSMUST00000188339 1600 ntBASIC6.93□□□□□ -1.3
Ccdc60Q8C4J0 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc60Q8C4J0 Gm43175-201ENSMUST00000198450 3810 ntBASIC6.93□□□□□ -1.3
Ccdc60Q8C4J0 A230103L15Rik-201ENSMUST00000207198 3872 ntBASIC6.93□□□□□ -1.3
Ccdc60Q8C4J0 Gm7970-201ENSMUST00000167615 1403 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
Ccdc60Q8C4J0 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Ccdc60Q8C4J0 Gm44801-201ENSMUST00000207644 2060 ntBASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 Olfr417-203ENSMUST00000220394 6080 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 Gm12655-202ENSMUST00000133884 925 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 Gm12472-201ENSMUST00000153232 1140 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 Gm28943-201ENSMUST00000186187 615 ntBASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 Gm28736-201ENSMUST00000186257 615 ntBASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 Gm29401-201ENSMUST00000186690 615 ntBASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 Gm29178-204ENSMUST00000186784 615 ntBASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 Gm28589-201ENSMUST00000186991 615 ntBASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 Gm28936-201ENSMUST00000187153 615 ntBASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 Gm29121-201ENSMUST00000187611 615 ntBASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 Gm28243-201ENSMUST00000187801 615 ntBASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 Gm28844-202ENSMUST00000187977 615 ntBASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 Gm29058-201ENSMUST00000189510 615 ntBASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 Gm29624-201ENSMUST00000190018 615 ntBASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 Gm28780-201ENSMUST00000190223 615 ntBASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 Gm28969-211ENSMUST00000190992 615 ntBASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 Gm28990-207ENSMUST00000191219 615 ntBASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 Gm36468-201ENSMUST00000192119 615 ntBASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 Gm31572-201ENSMUST00000193341 615 ntBASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 Gm37444-201ENSMUST00000193605 439 ntBASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 Gm30175-201ENSMUST00000194173 615 ntBASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 Gm30858-201ENSMUST00000195516 615 ntBASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 Gm43215-201ENSMUST00000199108 252 ntBASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 Gm44214-201ENSMUST00000204153 606 ntBASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 AC153548.2-201ENSMUST00000219770 885 ntBASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 AC155922.1-201ENSMUST00000220100 373 ntBASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 Smr3a-201ENSMUST00000031211 635 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 Defa17-201ENSMUST00000079528 397 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 Gm23511-201ENSMUST00000083084 164 ntBASIC6.92□□□□□ -1.3
Ccdc60Q8C4J0 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms