Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Nup54Q8BTS4 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Olfr701-203ENSMUST00000217739 4100 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Gm13648-201ENSMUST00000138361 1536 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC5.73□□□□□ -1.49
Nup54Q8BTS4 BC055308-201ENSMUST00000193380 2538 ntBASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
Nup54Q8BTS4 AC121094.1-201ENSMUST00000224766 1345 ntBASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.73□□□□□ -1.49
Nup54Q8BTS4 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Nup54Q8BTS4 Gm43386-201ENSMUST00000199654 4001 ntBASIC5.72□□□□□ -1.49
Nup54Q8BTS4 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Nup54Q8BTS4 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC5.72□□□□□ -1.49
Nup54Q8BTS4 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Nup54Q8BTS4 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
Nup54Q8BTS4 Gm44000-201ENSMUST00000205038 1478 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Nup54Q8BTS4 Olfr721-ps1-203ENSMUST00000215479 3075 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Nup54Q8BTS4 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Nup54Q8BTS4 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Nup54Q8BTS4 Olfr25-202ENSMUST00000212354 1362 ntAPPRIS ALT2 BASIC5.72□□□□□ -1.49
Nup54Q8BTS4 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Nup54Q8BTS4 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Nup54Q8BTS4 AC169985.1-201ENSMUST00000223648 2439 ntBASIC5.72□□□□□ -1.49
Nup54Q8BTS4 Mir546-201ENSMUST00000102105 121 ntBASIC5.72□□□□□ -1.49
Nup54Q8BTS4 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC5.72□□□□□ -1.49
Nup54Q8BTS4 Gm12267-201ENSMUST00000121609 761 ntBASIC5.72□□□□□ -1.49
Nup54Q8BTS4 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Nup54Q8BTS4 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC5.72□□□□□ -1.49
Nup54Q8BTS4 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Nup54Q8BTS4 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC5.72□□□□□ -1.49
Nup54Q8BTS4 Gm38122-201ENSMUST00000192679 885 ntBASIC5.72□□□□□ -1.49
Nup54Q8BTS4 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC5.72□□□□□ -1.49
Nup54Q8BTS4 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC5.72□□□□□ -1.49
Nup54Q8BTS4 AC134333.1-201ENSMUST00000204536 944 ntBASIC5.72□□□□□ -1.49
Nup54Q8BTS4 Gm44539-201ENSMUST00000206010 238 ntBASIC5.72□□□□□ -1.49
Nup54Q8BTS4 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.72□□□□□ -1.49
Nup54Q8BTS4 Gm45574-201ENSMUST00000210921 331 ntBASIC5.72□□□□□ -1.49
Nup54Q8BTS4 Gm45870-201ENSMUST00000211269 601 ntBASIC5.72□□□□□ -1.49
Nup54Q8BTS4 Gm18705-201ENSMUST00000215985 913 ntBASIC5.72□□□□□ -1.49
Nup54Q8BTS4 H60c-203ENSMUST00000216211 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Nup54Q8BTS4 AC165347.1-201ENSMUST00000224089 1025 ntBASIC5.72□□□□□ -1.49
Nup54Q8BTS4 AV026068-220ENSMUST00000224153 1147 ntBASIC5.72□□□□□ -1.49
Nup54Q8BTS4 AC164618.3-201ENSMUST00000224863 681 ntBASIC5.72□□□□□ -1.49
Nup54Q8BTS4 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Nup54Q8BTS4 Olfr1110-201ENSMUST00000099861 939 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Nup54Q8BTS4 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Nup54Q8BTS4 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
Nup54Q8BTS4 AC107232.1-201ENSMUST00000227785 1503 ntBASIC5.72□□□□□ -1.49
Nup54Q8BTS4 Cd44-203ENSMUST00000099673 2848 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Nup54Q8BTS4 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
Nup54Q8BTS4 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Nup54Q8BTS4 AC162908.1-201ENSMUST00000219164 4563 ntBASIC5.72□□□□□ -1.49
Nup54Q8BTS4 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
Nup54Q8BTS4 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Nup54Q8BTS4 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Nup54Q8BTS4 Gm28672-201ENSMUST00000188727 1490 ntTSL 5 BASIC5.71□□□□□ -1.49
Nup54Q8BTS4 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
Nup54Q8BTS4 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC5.71□□□□□ -1.49
Nup54Q8BTS4 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
Nup54Q8BTS4 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
Nup54Q8BTS4 Gm7919-201ENSMUST00000202043 1389 ntBASIC5.71□□□□□ -1.5
Nup54Q8BTS4 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nup54Q8BTS4 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC5.71□□□□□ -1.5
Nup54Q8BTS4 Gm23294-201ENSMUST00000104150 164 ntBASIC5.71□□□□□ -1.5
Nup54Q8BTS4 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Nup54Q8BTS4 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
Nup54Q8BTS4 Gm13311-201ENSMUST00000117863 379 ntBASIC5.71□□□□□ -1.5
Nup54Q8BTS4 Gm13681-201ENSMUST00000117925 210 ntBASIC5.71□□□□□ -1.5
Nup54Q8BTS4 Oosp3-202ENSMUST00000119053 621 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Nup54Q8BTS4 Mup-ps19-201ENSMUST00000120390 519 ntBASIC5.71□□□□□ -1.5
Nup54Q8BTS4 Gm11679-201ENSMUST00000121830 779 ntBASIC5.71□□□□□ -1.5
Nup54Q8BTS4 Gm8061-201ENSMUST00000122380 350 ntBASIC5.71□□□□□ -1.5
Nup54Q8BTS4 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC5.71□□□□□ -1.5
Nup54Q8BTS4 Gm26172-201ENSMUST00000158421 134 ntBASIC5.71□□□□□ -1.5
Nup54Q8BTS4 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Nup54Q8BTS4 Gm17511-201ENSMUST00000172206 342 ntBASIC5.71□□□□□ -1.5
Nup54Q8BTS4 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC5.71□□□□□ -1.5
Nup54Q8BTS4 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC5.71□□□□□ -1.5
Nup54Q8BTS4 Gm27754-201ENSMUST00000183340 126 ntBASIC5.71□□□□□ -1.5
Nup54Q8BTS4 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nup54Q8BTS4 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Nup54Q8BTS4 Gm28792-201ENSMUST00000191482 419 ntTSL 3 BASIC5.71□□□□□ -1.5
Nup54Q8BTS4 Ighv1-27-201ENSMUST00000194473 340 ntBASIC5.71□□□□□ -1.5
Nup54Q8BTS4 Gm43215-201ENSMUST00000199108 252 ntBASIC5.71□□□□□ -1.5
Nup54Q8BTS4 Gm44132-201ENSMUST00000205142 151 ntBASIC5.71□□□□□ -1.5
Nup54Q8BTS4 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC5.71□□□□□ -1.5
Nup54Q8BTS4 Gm33178-201ENSMUST00000212090 257 ntBASIC5.71□□□□□ -1.5
Nup54Q8BTS4 Gm46192-201ENSMUST00000217894 326 ntBASIC5.71□□□□□ -1.5
Nup54Q8BTS4 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC5.71□□□□□ -1.5
Nup54Q8BTS4 AC118230.1-201ENSMUST00000220196 656 ntBASIC5.71□□□□□ -1.5
Nup54Q8BTS4 AC154283.1-201ENSMUST00000228417 389 ntBASIC5.71□□□□□ -1.5
Nup54Q8BTS4 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC5.71□□□□□ -1.5
Nup54Q8BTS4 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms