Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 AC160028.2-201ENSMUST00000218937 2519 ntBASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Toporsl-201ENSMUST00000029995 2668 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Robo2-210ENSMUST00000226478 8059 ntBASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Gm23834-201ENSMUST00000104436 129 ntBASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Gm9427-201ENSMUST00000116187 651 ntBASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Defa-ps1-201ENSMUST00000119062 282 ntBASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Gm11746-201ENSMUST00000119843 821 ntBASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Defa-ps6-201ENSMUST00000122172 282 ntBASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Gm3757-201ENSMUST00000125878 675 ntBASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Gm4764-201ENSMUST00000130207 1233 ntBASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Gm25219-201ENSMUST00000157545 330 ntBASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Gm16138-201ENSMUST00000159341 821 ntBASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Gm7152-201ENSMUST00000163570 605 ntBASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Gm17085-201ENSMUST00000165425 502 ntBASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Rsph10b-204ENSMUST00000169758 702 ntTSL 5 BASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Gm23632-201ENSMUST00000175289 125 ntBASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Mir7j-201ENSMUST00000184427 122 ntBASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Gm7634-201ENSMUST00000185778 553 ntBASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Gm7967-203ENSMUST00000191409 1049 ntTSL 5 BASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Gm38279-201ENSMUST00000194067 1131 ntBASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Gm37270-201ENSMUST00000194277 330 ntBASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Gm37864-201ENSMUST00000195308 3075 ntBASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 2010309G21Rik-201ENSMUST00000198927 458 ntTSL 3 BASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Gm36378-201ENSMUST00000201709 388 ntBASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Gm44227-201ENSMUST00000203576 241 ntBASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Gm17822-201ENSMUST00000204307 351 ntBASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Gm44724-203ENSMUST00000208430 998 ntTSL 5 BASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 AC161252.2-201ENSMUST00000224978 374 ntBASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Foxp2-201ENSMUST00000031545 5647 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
Scaf4Q6PFF0 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 Mat2a-206ENSMUST00000206692 1400 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 Lrrtm4-208ENSMUST00000147663 3033 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 Lrrc51-203ENSMUST00000106963 835 ntTSL 2 BASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 Gm13141-201ENSMUST00000117417 456 ntBASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 Gm13728-201ENSMUST00000117471 400 ntBASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 Gm13463-201ENSMUST00000119020 233 ntBASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 Gm13357-201ENSMUST00000120528 537 ntBASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 Gm16428-201ENSMUST00000121193 723 ntBASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 Gm13642-201ENSMUST00000121697 381 ntBASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 Mir1903-201ENSMUST00000122574 80 ntBASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 Gm15418-201ENSMUST00000151014 677 ntTSL 5 BASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 Gm17194-201ENSMUST00000164610 348 ntBASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 Gm7654-201ENSMUST00000186738 683 ntBASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 Gm18875-201ENSMUST00000188563 882 ntBASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 1700034P13Rik-204ENSMUST00000189431 555 ntTSL 5 BASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 Gm42963-201ENSMUST00000202943 1217 ntBASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 Gm44404-201ENSMUST00000203979 636 ntBASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 Gm43922-201ENSMUST00000205071 328 ntBASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 Olfr1498-ps1-201ENSMUST00000208721 991 ntBASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 Olfr915-201ENSMUST00000215191 933 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 Gm4808-201ENSMUST00000222283 1203 ntBASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 AC154481.1-201ENSMUST00000223532 331 ntBASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 AC165260.3-201ENSMUST00000225101 665 ntBASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 AC124395.1-201ENSMUST00000225940 707 ntBASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 AC146601.1-201ENSMUST00000227910 905 ntBASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC6.28□□□□□ -1.4
Scaf4Q6PFF0 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms