Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Gm3424-201ENSMUST00000164585 1758 ntAPPRIS P5 TSL 5 BASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Usp49Q6P9L4 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Usp49Q6P9L4 AC112972.2-201ENSMUST00000228702 2210 ntBASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Cep192-201ENSMUST00000025425 8093 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Usp49Q6P9L4 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Gm8761-201ENSMUST00000121507 955 ntBASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Gm22959-201ENSMUST00000122514 303 ntBASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Gm25363-201ENSMUST00000158850 245 ntBASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Gm16139-201ENSMUST00000160015 420 ntBASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Prg4-206ENSMUST00000161611 3821 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Vmn1r-ps46-201ENSMUST00000173862 949 ntBASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Gm23872-201ENSMUST00000175432 77 ntBASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Gm11168-203ENSMUST00000178348 672 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Gm27679-201ENSMUST00000184612 84 ntBASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Gm37581-201ENSMUST00000192371 988 ntBASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Gm18865-201ENSMUST00000193011 1171 ntBASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Gm8929-201ENSMUST00000197781 1132 ntBASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Gm9278-201ENSMUST00000205508 553 ntBASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Gm38590-201ENSMUST00000209515 970 ntTSL 5 BASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC6.35□□□□□ -1.39
Usp49Q6P9L4 AC174797.2-203ENSMUST00000224017 716 ntBASIC6.35□□□□□ -1.39
Usp49Q6P9L4 AC154595.2-201ENSMUST00000225067 310 ntBASIC6.35□□□□□ -1.39
Usp49Q6P9L4 AC122035.2-201ENSMUST00000228698 462 ntBASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Olfr844-201ENSMUST00000054106 930 ntBASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Gm43359-201ENSMUST00000197944 2200 ntBASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Gm21292-201ENSMUST00000171947 1563 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Gm43027-201ENSMUST00000202906 3691 ntBASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Usp49Q6P9L4 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Usp49Q6P9L4 AC159896.3-201ENSMUST00000215904 3835 ntBASIC6.34□□□□□ -1.39
Usp49Q6P9L4 AC159308.1-201ENSMUST00000216615 1351 ntBASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Spata22-201ENSMUST00000117445 3200 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Gm43341-201ENSMUST00000200104 1308 ntBASIC6.34□□□□□ -1.39
Usp49Q6P9L4 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Aadacl3-201ENSMUST00000105749 3153 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Ighv1-20-201ENSMUST00000103506 348 ntAPPRIS ALT2 BASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Gm15078-201ENSMUST00000118371 782 ntBASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Gm5754-201ENSMUST00000118774 892 ntBASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Gm13473-201ENSMUST00000119289 367 ntBASIC6.34□□□□□ -1.39
Usp49Q6P9L4 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Gm22600-201ENSMUST00000157598 269 ntBASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Gm23280-201ENSMUST00000157905 139 ntBASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Gm25227-201ENSMUST00000158204 112 ntBASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Gm6223-201ENSMUST00000178436 871 ntBASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Gm27158-201ENSMUST00000183813 238 ntBASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Gm29356-201ENSMUST00000186935 373 ntBASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Gm38131-201ENSMUST00000192449 430 ntBASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Gm31306-201ENSMUST00000197517 508 ntBASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Gm42619-201ENSMUST00000197564 1136 ntBASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Gm44585-201ENSMUST00000207150 607 ntBASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Gm44656-201ENSMUST00000208428 490 ntBASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Cers3-202ENSMUST00000208521 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Gm45343-201ENSMUST00000210452 828 ntBASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Gm19269-201ENSMUST00000211401 804 ntBASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Gm45750-201ENSMUST00000211966 354 ntBASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Gm46223-201ENSMUST00000215196 675 ntBASIC6.34□□□□□ -1.39
Usp49Q6P9L4 AC160413.1-201ENSMUST00000217909 932 ntTSL 5 BASIC6.34□□□□□ -1.39
Usp49Q6P9L4 Gm19540-201ENSMUST00000221843 810 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 252.2 ms