Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC5.79□□□□□ -1.48
Ccbe1Q3MI99 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC5.79□□□□□ -1.48
Ccbe1Q3MI99 Gm14976-201ENSMUST00000117055 1394 ntBASIC5.79□□□□□ -1.48
Ccbe1Q3MI99 Rpgrip1l-201ENSMUST00000047783 7009 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ccbe1Q3MI99 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ccbe1Q3MI99 Gm44895-201ENSMUST00000206670 1538 ntBASIC5.79□□□□□ -1.48
Ccbe1Q3MI99 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ccbe1Q3MI99 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ccbe1Q3MI99 Adgrg2-202ENSMUST00000112400 4682 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Gm21846-201ENSMUST00000179257 3073 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Gm18716-201ENSMUST00000204507 1603 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Gm37814-201ENSMUST00000195820 3644 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Gm24142-201ENSMUST00000101960 107 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Mir503-201ENSMUST00000102168 71 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Slc35a5-202ENSMUST00000114600 679 ntTSL 3 BASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Gm14932-201ENSMUST00000117112 453 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Gm15739-201ENSMUST00000118049 872 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Gm11263-201ENSMUST00000121853 749 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Gm22276-201ENSMUST00000122469 129 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 4930587A21Rik-201ENSMUST00000128588 851 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Gm25057-201ENSMUST00000157366 88 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Gm16297-201ENSMUST00000161466 459 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Gm17421-201ENSMUST00000167845 674 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Gm17973-201ENSMUST00000174509 520 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Gm8993-201ENSMUST00000182182 983 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Gm28724-201ENSMUST00000186149 625 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Gm21181-201ENSMUST00000186249 330 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Gm28113-201ENSMUST00000188280 229 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Gm37682-201ENSMUST00000191776 522 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Gm36928-201ENSMUST00000192466 694 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Gm37191-201ENSMUST00000193346 388 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Gm37780-201ENSMUST00000194117 1873 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Gm37325-201ENSMUST00000194971 694 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Gm43382-201ENSMUST00000198954 838 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Gm17908-201ENSMUST00000205552 1256 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Gm44565-201ENSMUST00000208194 269 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Gm2961-201ENSMUST00000211074 772 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 AC156795.1-201ENSMUST00000214655 414 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 AC115793.1-201ENSMUST00000216605 215 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 AC162467.1-201ENSMUST00000220254 621 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Gm7240-201ENSMUST00000220769 664 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 AC122327.2-201ENSMUST00000220883 120 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 AC122327.3-201ENSMUST00000221852 120 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 AC166341.1-201ENSMUST00000223360 105 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 AC238940.2-201ENSMUST00000224202 330 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Diaph3-206ENSMUST00000226745 713 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 AC164436.1-201ENSMUST00000227074 772 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 AC166822.1-201ENSMUST00000227667 636 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 AC161537.1-202ENSMUST00000228450 868 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 AC165437.1-201ENSMUST00000228640 536 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 n-R5s60-201ENSMUST00000083299 119 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Mir365-2-201ENSMUST00000083555 112 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Gm37959-201ENSMUST00000191700 2897 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Cnga1-201ENSMUST00000087213 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Gm6545-201ENSMUST00000217186 1786 ntBASIC5.78□□□□□ -1.48
Ccbe1Q3MI99 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
Ccbe1Q3MI99 Gm38036-201ENSMUST00000194586 3564 ntBASIC5.77□□□□□ -1.49
Ccbe1Q3MI99 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Ccbe1Q3MI99 Gm45311-201ENSMUST00000211086 1330 ntBASIC5.77□□□□□ -1.49
Ccbe1Q3MI99 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Ccbe1Q3MI99 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms