Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Cdx4Q07424 Gm18865-201ENSMUST00000193011 1171 ntBASIC4.89□□□□□ -1.63
Cdx4Q07424 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC4.89□□□□□ -1.63
Cdx4Q07424 Gm37404-201ENSMUST00000195726 359 ntBASIC4.89□□□□□ -1.63
Cdx4Q07424 Gm29784-201ENSMUST00000196217 406 ntBASIC4.89□□□□□ -1.63
Cdx4Q07424 Gm43238-201ENSMUST00000196463 359 ntBASIC4.89□□□□□ -1.63
Cdx4Q07424 Gm8454-201ENSMUST00000196980 811 ntBASIC4.89□□□□□ -1.63
Cdx4Q07424 Rpl9-ps8-201ENSMUST00000198343 562 ntBASIC4.89□□□□□ -1.63
Cdx4Q07424 Gm19104-201ENSMUST00000198392 679 ntBASIC4.89□□□□□ -1.63
Cdx4Q07424 Gm6366-201ENSMUST00000198766 826 ntBASIC4.89□□□□□ -1.63
Cdx4Q07424 Gm18599-201ENSMUST00000206729 1125 ntBASIC4.89□□□□□ -1.63
Cdx4Q07424 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Cdx4Q07424 4933404K13Rik-201ENSMUST00000214651 937 ntTSL 3 BASIC4.89□□□□□ -1.63
Cdx4Q07424 Gm46364-201ENSMUST00000218548 319 ntBASIC4.89□□□□□ -1.63
Cdx4Q07424 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC4.89□□□□□ -1.63
Cdx4Q07424 AC134917.2-201ENSMUST00000223354 124 ntBASIC4.89□□□□□ -1.63
Cdx4Q07424 AL671874.1-201ENSMUST00000223746 1123 ntBASIC4.89□□□□□ -1.63
Cdx4Q07424 AC164295.1-201ENSMUST00000224861 186 ntBASIC4.89□□□□□ -1.63
Cdx4Q07424 AC157572.4-201ENSMUST00000228203 549 ntBASIC4.89□□□□□ -1.63
Cdx4Q07424 AC129208.2-201ENSMUST00000228506 320 ntBASIC4.89□□□□□ -1.63
Cdx4Q07424 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cdx4Q07424 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Cdx4Q07424 F730035P03Rik-201ENSMUST00000065741 917 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Cdx4Q07424 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Cdx4Q07424 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Cdx4Q07424 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cdx4Q07424 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Cdx4Q07424 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Cdx4Q07424 Gm22578-201ENSMUST00000083730 107 ntBASIC4.89□□□□□ -1.63
Cdx4Q07424 Gm24032-201ENSMUST00000083932 159 ntBASIC4.89□□□□□ -1.63
Cdx4Q07424 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC4.89□□□□□ -1.63
Cdx4Q07424 Orc2-202ENSMUST00000114325 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cdx4Q07424 Cc2d2b-205ENSMUST00000224596 4762 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Cdx4Q07424 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
Cdx4Q07424 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cdx4Q07424 Jade3-202ENSMUST00000115384 4866 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cdx4Q07424 Gm38366-201ENSMUST00000193127 1934 ntBASIC4.89□□□□□ -1.63
Cdx4Q07424 AC160028.2-201ENSMUST00000218937 2519 ntBASIC4.89□□□□□ -1.63
Cdx4Q07424 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Cdx4Q07424 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Cdx4Q07424 4930568G15Rik-201ENSMUST00000193317 3218 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Cdx4Q07424 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cdx4Q07424 Olfr373-203ENSMUST00000215198 3923 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Cdx4Q07424 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cdx4Q07424 Gm37289-201ENSMUST00000195409 1402 ntBASIC4.89□□□□□ -1.63
Cdx4Q07424 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cdx4Q07424 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Cdx4Q07424 Gm14367-201ENSMUST00000119214 1497 ntBASIC4.88□□□□□ -1.63
Cdx4Q07424 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Lgi1-206ENSMUST00000198045 1483 ntTSL 5 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdx4Q07424 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
Cdx4Q07424 C530043A13Rik-202ENSMUST00000188155 1512 ntTSL 2 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Gm18879-201ENSMUST00000221187 1537 ntBASIC4.88□□□□□ -1.63
Cdx4Q07424 4930544L04Rik-202ENSMUST00000211181 3204 ntBASIC4.88□□□□□ -1.63
Cdx4Q07424 AC131747.2-201ENSMUST00000226121 1895 ntBASIC4.88□□□□□ -1.63
Cdx4Q07424 Gm42892-201ENSMUST00000196227 3973 ntBASIC4.88□□□□□ -1.63
Cdx4Q07424 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Cdx4Q07424 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Cdx4Q07424 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdx4Q07424 Gm20300-201ENSMUST00000214634 3440 ntBASIC4.88□□□□□ -1.63
Cdx4Q07424 Serpinb1c-201ENSMUST00000021834 1633 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Gm26422-201ENSMUST00000104276 132 ntBASIC4.88□□□□□ -1.63
Cdx4Q07424 Gm4596-201ENSMUST00000117197 442 ntBASIC4.88□□□□□ -1.63
Cdx4Q07424 Gm13566-201ENSMUST00000117428 1142 ntBASIC4.88□□□□□ -1.63
Cdx4Q07424 Gm14624-201ENSMUST00000117746 192 ntBASIC4.88□□□□□ -1.63
Cdx4Q07424 Gm9432-201ENSMUST00000117810 759 ntBASIC4.88□□□□□ -1.63
Cdx4Q07424 Gm15971-201ENSMUST00000119372 211 ntBASIC4.88□□□□□ -1.63
Cdx4Q07424 Gm16016-201ENSMUST00000120831 550 ntBASIC4.88□□□□□ -1.63
Cdx4Q07424 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC4.88□□□□□ -1.63
Cdx4Q07424 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC4.88□□□□□ -1.63
Cdx4Q07424 Gm15502-201ENSMUST00000121449 208 ntBASIC4.88□□□□□ -1.63
Cdx4Q07424 Gm11341-201ENSMUST00000122316 447 ntBASIC4.88□□□□□ -1.63
Cdx4Q07424 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Cdx4Q07424 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Cdx4Q07424 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC4.88□□□□□ -1.63
Cdx4Q07424 4430402I18Rik-206ENSMUST00000164777 1066 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Cdx4Q07424 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC4.88□□□□□ -1.63
Cdx4Q07424 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC4.88□□□□□ -1.63
Cdx4Q07424 Gm26933-201ENSMUST00000182320 827 ntBASIC4.88□□□□□ -1.63
Cdx4Q07424 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC4.88□□□□□ -1.63
Cdx4Q07424 Mir6348-201ENSMUST00000183804 120 ntBASIC4.88□□□□□ -1.63
Cdx4Q07424 Mir6911-201ENSMUST00000184241 69 ntBASIC4.88□□□□□ -1.63
Cdx4Q07424 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC4.88□□□□□ -1.63
Cdx4Q07424 1700044C05Rik-201ENSMUST00000186060 898 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms