Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sox9Q04887 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Sox9Q04887 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sox9Q04887 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC6.52□□□□□ -1.37
Sox9Q04887 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Sox9Q04887 AC140210.1-201ENSMUST00000224961 534 ntBASIC6.52□□□□□ -1.37
Sox9Q04887 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Sox9Q04887 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Sox9Q04887 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Sox9Q04887 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Sox9Q04887 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
Sox9Q04887 Olfr1348-201ENSMUST00000086319 957 ntTSL 5 BASIC6.52□□□□□ -1.37
Sox9Q04887 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sox9Q04887 Gm38120-201ENSMUST00000195506 4642 ntBASIC6.52□□□□□ -1.37
Sox9Q04887 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC6.52□□□□□ -1.37
Sox9Q04887 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC6.52□□□□□ -1.37
Sox9Q04887 Gm37685-201ENSMUST00000193507 2177 ntBASIC6.52□□□□□ -1.37
Sox9Q04887 Gm39465-201ENSMUST00000213810 9813 ntTSL 3 BASIC6.52□□□□□ -1.37
Sox9Q04887 Gk-208ENSMUST00000156390 4245 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sox9Q04887 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sox9Q04887 Gm5886-203ENSMUST00000203983 2613 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sox9Q04887 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Sox9Q04887 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Sox9Q04887 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Sox9Q04887 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
Sox9Q04887 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Sox9Q04887 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC6.52□□□□□ -1.37
Sox9Q04887 Myh8-202ENSMUST00000108685 2306 ntTSL 5 BASIC6.51□□□□□ -1.37
Sox9Q04887 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sox9Q04887 Frmpd4-203ENSMUST00000112147 8607 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sox9Q04887 Angptl1-202ENSMUST00000111720 1332 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Sox9Q04887 Gm4973-201ENSMUST00000206925 1334 ntBASIC6.51□□□□□ -1.37
Sox9Q04887 AC166358.5-201ENSMUST00000220706 1302 ntBASIC6.51□□□□□ -1.37
Sox9Q04887 Gm44800-201ENSMUST00000207510 1855 ntBASIC6.51□□□□□ -1.37
Sox9Q04887 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Sox9Q04887 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC6.51□□□□□ -1.37
Sox9Q04887 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Sox9Q04887 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Sox9Q04887 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
Sox9Q04887 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Sox9Q04887 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sox9Q04887 Vmn2r85-201ENSMUST00000171811 3042 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
Sox9Q04887 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC6.51□□□□□ -1.37
Sox9Q04887 Krcc1-202ENSMUST00000168700 1749 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sox9Q04887 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sox9Q04887 Gm38077-201ENSMUST00000193657 3245 ntBASIC6.51□□□□□ -1.37
Sox9Q04887 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Sox9Q04887 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sox9Q04887 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC6.51□□□□□ -1.37
Sox9Q04887 Ighv1-53-201ENSMUST00000103523 351 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Sox9Q04887 Ighv1-69-201ENSMUST00000103539 348 ntAPPRIS ALT2 BASIC6.51□□□□□ -1.37
Sox9Q04887 Gm12697-201ENSMUST00000118008 667 ntBASIC6.51□□□□□ -1.37
Sox9Q04887 Gm11987-201ENSMUST00000118524 381 ntBASIC6.51□□□□□ -1.37
Sox9Q04887 Gm8534-201ENSMUST00000118553 766 ntBASIC6.51□□□□□ -1.37
Sox9Q04887 Gm13222-201ENSMUST00000119638 138 ntBASIC6.51□□□□□ -1.37
Sox9Q04887 Gm14267-201ENSMUST00000119751 496 ntBASIC6.51□□□□□ -1.37
Sox9Q04887 Gm16200-201ENSMUST00000120385 331 ntBASIC6.51□□□□□ -1.37
Sox9Q04887 Gm22106-201ENSMUST00000122544 127 ntBASIC6.51□□□□□ -1.37
Sox9Q04887 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC6.51□□□□□ -1.37
Sox9Q04887 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Sox9Q04887 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC6.51□□□□□ -1.37
Sox9Q04887 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC6.51□□□□□ -1.37
Sox9Q04887 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Sox9Q04887 Gm26312-201ENSMUST00000157769 165 ntBASIC6.51□□□□□ -1.37
Sox9Q04887 Gm24241-201ENSMUST00000157787 145 ntBASIC6.51□□□□□ -1.37
Sox9Q04887 Gm26372-201ENSMUST00000157831 236 ntBASIC6.51□□□□□ -1.37
Sox9Q04887 Synj2bp-203ENSMUST00000163402 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
Sox9Q04887 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Sox9Q04887 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Sox9Q04887 Tppp2-202ENSMUST00000177625 627 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
Sox9Q04887 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC6.51□□□□□ -1.37
Sox9Q04887 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
Sox9Q04887 Gm5798-202ENSMUST00000179987 582 ntTSL 3 BASIC6.51□□□□□ -1.37
Sox9Q04887 B230110C06Rik-202ENSMUST00000181936 938 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Sox9Q04887 Gm27845-201ENSMUST00000184479 114 ntBASIC6.51□□□□□ -1.37
Sox9Q04887 Mir6926-201ENSMUST00000184562 68 ntBASIC6.51□□□□□ -1.37
Sox9Q04887 Gm27755-201ENSMUST00000184623 132 ntBASIC6.51□□□□□ -1.37
Sox9Q04887 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC6.51□□□□□ -1.37
Sox9Q04887 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC6.51□□□□□ -1.37
Sox9Q04887 Gm37578-201ENSMUST00000192256 1177 ntBASIC6.51□□□□□ -1.37
Sox9Q04887 Gm37947-201ENSMUST00000192740 894 ntTSL 5 BASIC6.51□□□□□ -1.37
Sox9Q04887 Gm37770-201ENSMUST00000192855 772 ntBASIC6.51□□□□□ -1.37
Sox9Q04887 Gm36997-201ENSMUST00000195090 707 ntBASIC6.51□□□□□ -1.37
Sox9Q04887 Gm42707-201ENSMUST00000196620 322 ntTSL 5 BASIC6.51□□□□□ -1.37
Sox9Q04887 Gm44181-201ENSMUST00000203106 483 ntBASIC6.51□□□□□ -1.37
Sox9Q04887 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
Sox9Q04887 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC6.51□□□□□ -1.37
Sox9Q04887 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC6.51□□□□□ -1.37
Sox9Q04887 Gm20751-201ENSMUST00000210260 1270 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
Sox9Q04887 Gm18781-201ENSMUST00000211252 924 ntBASIC6.51□□□□□ -1.37
Sox9Q04887 Gm6657-204ENSMUST00000211288 1091 ntAPPRIS P5 TSL 5 BASIC6.51□□□□□ -1.37
Sox9Q04887 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC6.51□□□□□ -1.37
Sox9Q04887 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC6.51□□□□□ -1.37
Sox9Q04887 AC153961.2-201ENSMUST00000218877 164 ntBASIC6.51□□□□□ -1.37
Sox9Q04887 AC154636.3-201ENSMUST00000221489 1214 ntBASIC6.51□□□□□ -1.37
Sox9Q04887 CT030254.3-201ENSMUST00000225959 1231 ntBASIC6.51□□□□□ -1.37
Sox9Q04887 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
Sox9Q04887 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
Sox9Q04887 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC6.51□□□□□ -1.37
Sox9Q04887 Olfr878-201ENSMUST00000086061 1065 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 58.2 ms