Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 A730085K08Rik-201ENSMUST00000177015 2013 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
LtbrP50284 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC8.46□□□□□ -1.05
LtbrP50284 Cep135-201ENSMUST00000049060 5313 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
LtbrP50284 AC154270.2-201ENSMUST00000226755 2306 ntBASIC8.46□□□□□ -1.05
LtbrP50284 Prdm16-206ENSMUST00000105638 8601 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.05
LtbrP50284 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
LtbrP50284 Svil-210ENSMUST00000140448 7423 ntAPPRIS P3 TSL 5 BASIC8.46□□□□□ -1.06
LtbrP50284 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
LtbrP50284 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
LtbrP50284 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
LtbrP50284 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC8.46□□□□□ -1.06
LtbrP50284 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
LtbrP50284 Gm15113-201ENSMUST00000119280 836 ntBASIC8.46□□□□□ -1.06
LtbrP50284 Crisp2-203ENSMUST00000131699 538 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
LtbrP50284 Gm16758-201ENSMUST00000149552 3848 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
LtbrP50284 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC8.46□□□□□ -1.06
LtbrP50284 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC8.46□□□□□ -1.06
LtbrP50284 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC8.46□□□□□ -1.06
LtbrP50284 Gm27640-201ENSMUST00000184580 147 ntBASIC8.46□□□□□ -1.06
LtbrP50284 Gm7867-201ENSMUST00000189856 546 ntBASIC8.46□□□□□ -1.06
LtbrP50284 Gm36998-201ENSMUST00000193205 704 ntBASIC8.46□□□□□ -1.06
LtbrP50284 Gm42621-201ENSMUST00000198114 275 ntBASIC8.46□□□□□ -1.06
LtbrP50284 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC8.46□□□□□ -1.06
LtbrP50284 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
LtbrP50284 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC8.46□□□□□ -1.06
LtbrP50284 Gm44192-201ENSMUST00000204195 556 ntBASIC8.46□□□□□ -1.06
LtbrP50284 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
LtbrP50284 Gm44996-201ENSMUST00000208787 2980 ntBASIC8.46□□□□□ -1.06
LtbrP50284 Gm44812-202ENSMUST00000208999 1285 ntTSL 5 BASIC8.46□□□□□ -1.06
LtbrP50284 Gm19140-201ENSMUST00000209790 421 ntBASIC8.46□□□□□ -1.06
LtbrP50284 Gm45350-201ENSMUST00000210560 509 ntTSL 5 BASIC8.46□□□□□ -1.06
LtbrP50284 Gm4972-201ENSMUST00000211108 1254 ntBASIC8.46□□□□□ -1.06
LtbrP50284 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC8.46□□□□□ -1.06
LtbrP50284 AC192091.1-201ENSMUST00000218668 439 ntBASIC8.46□□□□□ -1.06
LtbrP50284 AC164618.1-201ENSMUST00000225769 592 ntBASIC8.46□□□□□ -1.06
LtbrP50284 Gm42639-201ENSMUST00000197061 1871 ntBASIC8.46□□□□□ -1.06
LtbrP50284 Zfp473-202ENSMUST00000118162 3091 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
LtbrP50284 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
LtbrP50284 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
LtbrP50284 AC158986.1-201ENSMUST00000228391 3455 ntBASIC8.46□□□□□ -1.06
LtbrP50284 Dpy19l3-201ENSMUST00000051377 8006 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
LtbrP50284 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC8.46□□□□□ -1.06
LtbrP50284 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC8.46□□□□□ -1.06
LtbrP50284 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LtbrP50284 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
LtbrP50284 Gm28109-201ENSMUST00000189979 2167 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
LtbrP50284 AC107232.1-201ENSMUST00000227785 1503 ntBASIC8.45□□□□□ -1.06
LtbrP50284 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC8.45□□□□□ -1.06
LtbrP50284 Olfr524-202ENSMUST00000215815 5044 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
LtbrP50284 CT010577.1-202ENSMUST00000226187 1903 ntBASIC8.45□□□□□ -1.06
LtbrP50284 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
LtbrP50284 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
LtbrP50284 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LtbrP50284 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC8.45□□□□□ -1.06
LtbrP50284 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
LtbrP50284 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC8.45□□□□□ -1.06
LtbrP50284 Gm6923-201ENSMUST00000118343 406 ntBASIC8.45□□□□□ -1.06
LtbrP50284 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC8.45□□□□□ -1.06
LtbrP50284 Gm4886-201ENSMUST00000121874 1176 ntBASIC8.45□□□□□ -1.06
LtbrP50284 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC8.45□□□□□ -1.06
LtbrP50284 Gm25395-201ENSMUST00000157343 272 ntBASIC8.45□□□□□ -1.06
LtbrP50284 Gm26349-201ENSMUST00000157530 130 ntBASIC8.45□□□□□ -1.06
LtbrP50284 Gm17223-201ENSMUST00000171413 481 ntBASIC8.45□□□□□ -1.06
LtbrP50284 Gm20673-201ENSMUST00000177167 430 ntBASIC8.45□□□□□ -1.06
LtbrP50284 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC8.45□□□□□ -1.06
LtbrP50284 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC8.45□□□□□ -1.06
LtbrP50284 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC8.45□□□□□ -1.06
LtbrP50284 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC8.45□□□□□ -1.06
LtbrP50284 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC8.45□□□□□ -1.06
LtbrP50284 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC8.45□□□□□ -1.06
LtbrP50284 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC8.45□□□□□ -1.06
LtbrP50284 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC8.45□□□□□ -1.06
LtbrP50284 Rps12l1-201ENSMUST00000183090 399 ntBASIC8.45□□□□□ -1.06
LtbrP50284 Mir378d-201ENSMUST00000184232 110 ntBASIC8.45□□□□□ -1.06
LtbrP50284 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC8.45□□□□□ -1.06
LtbrP50284 Scgb1b17-201ENSMUST00000187081 417 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
LtbrP50284 Scgb1b10-201ENSMUST00000187257 417 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
LtbrP50284 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
LtbrP50284 Scgb1b15-201ENSMUST00000189118 417 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
LtbrP50284 Trbv12-3-201ENSMUST00000192675 372 ntBASIC8.45□□□□□ -1.06
LtbrP50284 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC8.45□□□□□ -1.06
LtbrP50284 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
LtbrP50284 AC165349.1-201ENSMUST00000217896 424 ntBASIC8.45□□□□□ -1.06
LtbrP50284 AC101677.1-201ENSMUST00000218590 158 ntBASIC8.45□□□□□ -1.06
LtbrP50284 AC124601.1-201ENSMUST00000220531 135 ntBASIC8.45□□□□□ -1.06
LtbrP50284 AC125539.2-201ENSMUST00000228339 753 ntBASIC8.45□□□□□ -1.06
LtbrP50284 CT009550.2-201ENSMUST00000228851 399 ntBASIC8.45□□□□□ -1.06
LtbrP50284 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
LtbrP50284 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
LtbrP50284 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
LtbrP50284 Hpgds-201ENSMUST00000031982 3476 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LtbrP50284 Gm26945-201ENSMUST00000183191 2011 ntBASIC8.45□□□□□ -1.06
LtbrP50284 Gm2987-201ENSMUST00000187673 1693 ntBASIC8.45□□□□□ -1.06
LtbrP50284 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
LtbrP50284 AC139750.1-201ENSMUST00000223962 1300 ntBASIC8.45□□□□□ -1.06
LtbrP50284 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
LtbrP50284 Slc17a6-201ENSMUST00000032710 4137 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LtbrP50284 Epb41-201ENSMUST00000030739 6565 ntAPPRIS P3 TSL 5 BASIC8.45□□□□□ -1.06
LtbrP50284 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
LtbrP50284 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 101.2 ms