Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC4.7□□□□□ -1.66
Nkx2-1P50220 Gm15935-202ENSMUST00000141656 298 ntTSL 2 BASIC4.7□□□□□ -1.66
Nkx2-1P50220 4930451E10Rik-202ENSMUST00000152292 557 ntTSL 3 BASIC4.7□□□□□ -1.66
Nkx2-1P50220 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Nkx2-1P50220 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Nkx2-1P50220 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC4.7□□□□□ -1.66
Nkx2-1P50220 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Nkx2-1P50220 Gm24155-201ENSMUST00000175259 110 ntBASIC4.7□□□□□ -1.66
Nkx2-1P50220 Gm22852-201ENSMUST00000177899 101 ntBASIC4.7□□□□□ -1.66
Nkx2-1P50220 Gm1972-201ENSMUST00000181606 964 ntBASIC4.7□□□□□ -1.66
Nkx2-1P50220 Sbp-203ENSMUST00000182519 368 ntTSL 2 BASIC4.7□□□□□ -1.66
Nkx2-1P50220 Gm27636-201ENSMUST00000184528 122 ntBASIC4.7□□□□□ -1.66
Nkx2-1P50220 Mhrt-202ENSMUST00000185798 447 ntTSL 3 BASIC4.7□□□□□ -1.66
Nkx2-1P50220 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC4.7□□□□□ -1.66
Nkx2-1P50220 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC4.7□□□□□ -1.66
Nkx2-1P50220 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Nkx2-1P50220 Gm43093-201ENSMUST00000202439 1213 ntBASIC4.7□□□□□ -1.66
Nkx2-1P50220 Gm45078-201ENSMUST00000205343 546 ntBASIC4.7□□□□□ -1.66
Nkx2-1P50220 Gm18599-201ENSMUST00000206729 1125 ntBASIC4.7□□□□□ -1.66
Nkx2-1P50220 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC4.7□□□□□ -1.66
Nkx2-1P50220 Gm45072-201ENSMUST00000208673 929 ntBASIC4.7□□□□□ -1.66
Nkx2-1P50220 Gm19212-201ENSMUST00000216642 862 ntBASIC4.7□□□□□ -1.66
Nkx2-1P50220 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Nkx2-1P50220 Gm8672-201ENSMUST00000221200 332 ntBASIC4.7□□□□□ -1.66
Nkx2-1P50220 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC4.7□□□□□ -1.66
Nkx2-1P50220 AC154595.2-201ENSMUST00000225067 310 ntBASIC4.7□□□□□ -1.66
Nkx2-1P50220 AC122290.1-201ENSMUST00000225631 1078 ntBASIC4.7□□□□□ -1.66
Nkx2-1P50220 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Nkx2-1P50220 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Nkx2-1P50220 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Nkx2-1P50220 Gm22005-201ENSMUST00000082795 141 ntBASIC4.7□□□□□ -1.66
Nkx2-1P50220 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Nkx2-1P50220 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC4.7□□□□□ -1.66
Nkx2-1P50220 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Nkx2-1P50220 Olfr888-202ENSMUST00000211851 2930 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
Nkx2-1P50220 Serpinb7-201ENSMUST00000086690 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Nkx2-1P50220 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC4.7□□□□□ -1.66
Nkx2-1P50220 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
Nkx2-1P50220 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Nkx2-1P50220 Vmn2r94-201ENSMUST00000172190 2457 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Nkx2-1P50220 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC4.7□□□□□ -1.66
Nkx2-1P50220 Depdc1a-203ENSMUST00000120272 3323 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Nkx2-1P50220 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
Nkx2-1P50220 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
Nkx2-1P50220 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Nkx2-1P50220 Fam107b-209ENSMUST00000226435 3602 ntBASIC4.7□□□□□ -1.66
Nkx2-1P50220 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Nkx2-1P50220 Gm5832-201ENSMUST00000121704 1582 ntBASIC4.7□□□□□ -1.66
Nkx2-1P50220 Gm18491-201ENSMUST00000192492 1594 ntBASIC4.7□□□□□ -1.66
Nkx2-1P50220 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Nkx2-1P50220 Lypd6-205ENSMUST00000169232 3499 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx2-1P50220 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx2-1P50220 AC123629.1-201ENSMUST00000225669 1364 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 AC151971.5-201ENSMUST00000214422 3254 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
Nkx2-1P50220 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx2-1P50220 Trim12a-201ENSMUST00000070943 1531 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx2-1P50220 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx2-1P50220 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx2-1P50220 4930404I05Rik-201ENSMUST00000125902 2675 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx2-1P50220 Gm11105-201ENSMUST00000112781 478 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 Rpl36a-201ENSMUST00000113211 483 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx2-1P50220 Gm20815-201ENSMUST00000115496 1224 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx2-1P50220 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx2-1P50220 Gm12131-201ENSMUST00000117479 359 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 Gm11699-201ENSMUST00000119016 401 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 Gm14115-201ENSMUST00000119242 482 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 Gm14065-201ENSMUST00000120848 585 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC4.69□□□□□ -1.66
Nkx2-1P50220 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx2-1P50220 Gm12239-201ENSMUST00000134285 500 ntTSL 5 BASIC4.69□□□□□ -1.66
Nkx2-1P50220 Mir1960-201ENSMUST00000157488 78 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 Gm24767-201ENSMUST00000158509 95 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 Gm16125-201ENSMUST00000159003 339 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 4430402I18Rik-203ENSMUST00000160542 1057 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx2-1P50220 Gm8582-201ENSMUST00000164061 789 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Nkx2-1P50220 Gm21772-201ENSMUST00000169213 478 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 Gm17126-201ENSMUST00000172276 523 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC4.69□□□□□ -1.66
Nkx2-1P50220 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 Gm3307-201ENSMUST00000176164 632 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Nkx2-1P50220 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 AF067061-201ENSMUST00000179905 1174 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Nkx2-1P50220 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC4.69□□□□□ -1.66
Nkx2-1P50220 Rps12l1-201ENSMUST00000183090 399 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 Gm29093-201ENSMUST00000187366 409 ntTSL 5 BASIC4.69□□□□□ -1.66
Nkx2-1P50220 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC4.69□□□□□ -1.66
Nkx2-1P50220 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 Gm28080-201ENSMUST00000188552 722 ntBASIC4.69□□□□□ -1.66
Nkx2-1P50220 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms