Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Tcrg-V7-201ENSMUST00000103553 368 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
VhlP40338 Gm12641-201ENSMUST00000117874 985 ntBASIC4.54□□□□□ -1.68
VhlP40338 Gm13835-201ENSMUST00000118459 685 ntBASIC4.54□□□□□ -1.68
VhlP40338 Vmn1r-ps95-201ENSMUST00000118641 903 ntBASIC4.54□□□□□ -1.68
VhlP40338 Gm6427-201ENSMUST00000118721 979 ntBASIC4.54□□□□□ -1.68
VhlP40338 Gm14783-201ENSMUST00000118900 663 ntBASIC4.54□□□□□ -1.68
VhlP40338 Gm6446-201ENSMUST00000120604 818 ntBASIC4.54□□□□□ -1.68
VhlP40338 Gm12494-201ENSMUST00000121684 521 ntBASIC4.54□□□□□ -1.68
VhlP40338 Gm12618-201ENSMUST00000121754 483 ntBASIC4.54□□□□□ -1.68
VhlP40338 Spdya-203ENSMUST00000144142 933 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VhlP40338 4930423M02Rik-202ENSMUST00000156903 1205 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VhlP40338 Vmn1r57-201ENSMUST00000170780 933 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
VhlP40338 Gm23806-201ENSMUST00000175157 109 ntBASIC4.54□□□□□ -1.68
VhlP40338 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VhlP40338 Mir3473g-201ENSMUST00000183494 136 ntBASIC4.54□□□□□ -1.68
VhlP40338 Gm27210-201ENSMUST00000184263 402 ntBASIC4.54□□□□□ -1.68
VhlP40338 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC4.54□□□□□ -1.68
VhlP40338 Gm29234-201ENSMUST00000187452 1262 ntBASIC4.54□□□□□ -1.68
VhlP40338 Gm29161-201ENSMUST00000188250 699 ntBASIC4.54□□□□□ -1.68
VhlP40338 Gm37073-201ENSMUST00000192469 1222 ntBASIC4.54□□□□□ -1.68
VhlP40338 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
VhlP40338 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
VhlP40338 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC4.54□□□□□ -1.68
VhlP40338 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
VhlP40338 Gm19880-201ENSMUST00000207731 318 ntBASIC4.54□□□□□ -1.68
VhlP40338 Gm3912-203ENSMUST00000211024 367 ntBASIC4.54□□□□□ -1.68
VhlP40338 Gm45334-201ENSMUST00000211118 1227 ntTSL 5 BASIC4.54□□□□□ -1.68
VhlP40338 Gm45485-201ENSMUST00000211229 357 ntBASIC4.54□□□□□ -1.68
VhlP40338 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VhlP40338 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC4.54□□□□□ -1.68
VhlP40338 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC4.54□□□□□ -1.68
VhlP40338 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC4.54□□□□□ -1.68
VhlP40338 AC140930.1-201ENSMUST00000221889 389 ntBASIC4.54□□□□□ -1.68
VhlP40338 AC129597.1-201ENSMUST00000223046 1234 ntBASIC4.54□□□□□ -1.68
VhlP40338 AL671874.1-201ENSMUST00000223746 1123 ntBASIC4.54□□□□□ -1.68
VhlP40338 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
VhlP40338 AC102139.1-201ENSMUST00000227000 251 ntBASIC4.54□□□□□ -1.68
VhlP40338 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VhlP40338 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VhlP40338 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
VhlP40338 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
VhlP40338 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VhlP40338 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
VhlP40338 Naalad2-207ENSMUST00000172171 4066 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
VhlP40338 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VhlP40338 A530076I17Rik-202ENSMUST00000228352 1524 ntBASIC4.54□□□□□ -1.68
VhlP40338 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
VhlP40338 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
VhlP40338 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
VhlP40338 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
VhlP40338 Gm37400-201ENSMUST00000193148 3605 ntBASIC4.54□□□□□ -1.68
VhlP40338 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
VhlP40338 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC4.54□□□□□ -1.68
VhlP40338 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
VhlP40338 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VhlP40338 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VhlP40338 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VhlP40338 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
VhlP40338 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VhlP40338 Gm44667-201ENSMUST00000207632 3337 ntBASIC4.53□□□□□ -1.68
VhlP40338 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
VhlP40338 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
VhlP40338 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VhlP40338 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
VhlP40338 Trbv4-201ENSMUST00000103265 393 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
VhlP40338 Gm13114-201ENSMUST00000117605 106 ntBASIC4.53□□□□□ -1.68
VhlP40338 Atf1-ps-201ENSMUST00000120608 810 ntBASIC4.53□□□□□ -1.68
VhlP40338 Gm7931-201ENSMUST00000121537 271 ntBASIC4.53□□□□□ -1.68
VhlP40338 Crem-207ENSMUST00000126578 915 ntTSL 5 BASIC4.53□□□□□ -1.68
VhlP40338 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VhlP40338 Gm25861-201ENSMUST00000158251 109 ntBASIC4.53□□□□□ -1.68
VhlP40338 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC4.53□□□□□ -1.68
VhlP40338 Zcchc10-201ENSMUST00000018383 1267 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VhlP40338 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VhlP40338 Gm38326-201ENSMUST00000194030 686 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VhlP40338 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VhlP40338 Gm20426-202ENSMUST00000204789 399 ntTSL 5 BASIC4.53□□□□□ -1.68
VhlP40338 AC112680.2-201ENSMUST00000213119 595 ntBASIC4.53□□□□□ -1.68
VhlP40338 Olfr1092-ps1-201ENSMUST00000216544 398 ntBASIC4.53□□□□□ -1.68
VhlP40338 CT033754.1-201ENSMUST00000216941 531 ntTSL 3 BASIC4.53□□□□□ -1.68
VhlP40338 AC153357.1-201ENSMUST00000219190 482 ntBASIC4.53□□□□□ -1.68
VhlP40338 AC132384.3-201ENSMUST00000219709 472 ntBASIC4.53□□□□□ -1.68
VhlP40338 Gm18413-201ENSMUST00000221573 655 ntBASIC4.53□□□□□ -1.68
VhlP40338 AC124826.1-201ENSMUST00000221651 325 ntBASIC4.53□□□□□ -1.68
VhlP40338 AC154627.3-201ENSMUST00000228441 334 ntBASIC4.53□□□□□ -1.68
VhlP40338 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VhlP40338 Cd84-201ENSMUST00000042302 1019 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
VhlP40338 Gm24454-201ENSMUST00000083349 132 ntBASIC4.53□□□□□ -1.68
VhlP40338 n-R5s69-201ENSMUST00000083872 119 ntBASIC4.53□□□□□ -1.68
VhlP40338 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
VhlP40338 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
VhlP40338 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VhlP40338 Gm43588-201ENSMUST00000201862 2298 ntBASIC4.53□□□□□ -1.68
VhlP40338 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
VhlP40338 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC4.53□□□□□ -1.68
VhlP40338 Gm42540-201ENSMUST00000200319 2008 ntBASIC4.53□□□□□ -1.68
VhlP40338 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
VhlP40338 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
VhlP40338 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
VhlP40338 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 112.1 ms