Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC7.68□□□□□ -1.18
Col18a1P39061 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col18a1P39061 Gm25176-201ENSMUST00000122640 125 ntBASIC7.68□□□□□ -1.18
Col18a1P39061 Crem-224ENSMUST00000147138 436 ntTSL 5 BASIC7.68□□□□□ -1.18
Col18a1P39061 Gm26069-201ENSMUST00000157497 277 ntBASIC7.68□□□□□ -1.18
Col18a1P39061 Gm25427-201ENSMUST00000157605 103 ntBASIC7.68□□□□□ -1.18
Col18a1P39061 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC7.68□□□□□ -1.18
Col18a1P39061 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Col18a1P39061 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC7.68□□□□□ -1.18
Col18a1P39061 Gm18843-201ENSMUST00000194982 719 ntBASIC7.68□□□□□ -1.18
Col18a1P39061 Mir7116-201ENSMUST00000195956 70 ntBASIC7.68□□□□□ -1.18
Col18a1P39061 Gm4290-201ENSMUST00000206897 814 ntBASIC7.68□□□□□ -1.18
Col18a1P39061 Olfr892-ps1-201ENSMUST00000211998 932 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Col18a1P39061 4930553I21Rik-201ENSMUST00000214016 580 ntBASIC7.68□□□□□ -1.18
Col18a1P39061 AC139294.1-201ENSMUST00000226708 571 ntBASIC7.68□□□□□ -1.18
Col18a1P39061 AC163646.1-201ENSMUST00000227704 397 ntBASIC7.68□□□□□ -1.18
Col18a1P39061 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col18a1P39061 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Col18a1P39061 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Col18a1P39061 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Col18a1P39061 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Col18a1P39061 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
Col18a1P39061 Slc43a2-211ENSMUST00000169547 7145 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col18a1P39061 Mast4-212ENSMUST00000171791 7647 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
Col18a1P39061 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col18a1P39061 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col18a1P39061 Gm19938-201ENSMUST00000192692 3259 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Col18a1P39061 Aebp2-201ENSMUST00000032359 5932 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col18a1P39061 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Col18a1P39061 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Col18a1P39061 Fam227a-203ENSMUST00000109648 5187 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Col18a1P39061 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col18a1P39061 Gm38120-201ENSMUST00000195506 4642 ntBASIC7.67□□□□□ -1.18
Col18a1P39061 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Col18a1P39061 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Col18a1P39061 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col18a1P39061 Rapgef6-210ENSMUST00000207429 5164 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col18a1P39061 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col18a1P39061 Gm23987-201ENSMUST00000117039 129 ntBASIC7.67□□□□□ -1.18
Col18a1P39061 Gm11912-201ENSMUST00000117235 264 ntBASIC7.67□□□□□ -1.18
Col18a1P39061 Gm15670-201ENSMUST00000117740 447 ntBASIC7.67□□□□□ -1.18
Col18a1P39061 Mup-ps14-201ENSMUST00000118437 532 ntBASIC7.67□□□□□ -1.18
Col18a1P39061 Gm12988-201ENSMUST00000119054 478 ntBASIC7.67□□□□□ -1.18
Col18a1P39061 Gm11925-201ENSMUST00000121375 535 ntBASIC7.67□□□□□ -1.18
Col18a1P39061 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Col18a1P39061 Gm27817-201ENSMUST00000184302 233 ntBASIC7.67□□□□□ -1.18
Col18a1P39061 9430087B13Rik-201ENSMUST00000196548 1085 ntBASIC7.67□□□□□ -1.18
Col18a1P39061 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC7.67□□□□□ -1.18
Col18a1P39061 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC7.67□□□□□ -1.18
Col18a1P39061 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC7.67□□□□□ -1.18
Col18a1P39061 Gm6009-201ENSMUST00000210848 280 ntBASIC7.67□□□□□ -1.18
Col18a1P39061 AC131117.1-201ENSMUST00000225154 1171 ntBASIC7.67□□□□□ -1.18
Col18a1P39061 AC165953.1-201ENSMUST00000226386 357 ntBASIC7.67□□□□□ -1.18
Col18a1P39061 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col18a1P39061 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Col18a1P39061 Olfr1205-201ENSMUST00000076438 924 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Col18a1P39061 Zfp934-201ENSMUST00000082203 993 ntTSL 5 BASIC7.67□□□□□ -1.18
Col18a1P39061 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col18a1P39061 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col18a1P39061 Cfap46-202ENSMUST00000129990 8180 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Col18a1P39061 Gm37057-201ENSMUST00000192624 1916 ntBASIC7.67□□□□□ -1.18
Col18a1P39061 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col18a1P39061 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Col18a1P39061 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Col18a1P39061 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col18a1P39061 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col18a1P39061 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Col18a1P39061 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Col18a1P39061 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col18a1P39061 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Col18a1P39061 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col18a1P39061 Mylk4-201ENSMUST00000057428 5571 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Col18a1P39061 Hypk-202ENSMUST00000110612 4170 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Col18a1P39061 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Col18a1P39061 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Col18a1P39061 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Col18a1P39061 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Col18a1P39061 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col18a1P39061 Plekha6-202ENSMUST00000105082 7085 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Col18a1P39061 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC7.67□□□□□ -1.18
Col18a1P39061 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC7.66□□□□□ -1.18
Col18a1P39061 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
Col18a1P39061 Serpinb1-ps1-201ENSMUST00000118548 586 ntBASIC7.66□□□□□ -1.18
Col18a1P39061 Gm11446-201ENSMUST00000121319 866 ntBASIC7.66□□□□□ -1.18
Col18a1P39061 Gm15057-201ENSMUST00000121516 534 ntBASIC7.66□□□□□ -1.18
Col18a1P39061 Gm16189-201ENSMUST00000123707 997 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col18a1P39061 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm22650-201ENSMUST00000175138 105 ntBASIC7.66□□□□□ -1.18
Col18a1P39061 Gm27155-201ENSMUST00000183716 898 ntBASIC7.66□□□□□ -1.18
Col18a1P39061 Gm28298-201ENSMUST00000185287 622 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm29581-201ENSMUST00000186083 622 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC7.66□□□□□ -1.18
Col18a1P39061 Gm28761-201ENSMUST00000186540 622 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms