Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Hoxc5P32043 Gm37018-201ENSMUST00000192441 3869 ntBASIC5.05□□□□□ -1.6
Hoxc5P32043 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Hoxc5P32043 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC5.05□□□□□ -1.6
Hoxc5P32043 Gm13544-201ENSMUST00000131189 2940 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Hoxc5P32043 Gm5890-201ENSMUST00000190145 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Hoxc5P32043 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Hoxc5P32043 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Hoxc5P32043 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Hoxc5P32043 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Hoxc5P32043 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Hoxc5P32043 Pifo-201ENSMUST00000010280 956 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
Hoxc5P32043 Mir466f-4-201ENSMUST00000116930 121 ntBASIC5.05□□□□□ -1.6
Hoxc5P32043 Gm11908-201ENSMUST00000117755 347 ntBASIC5.05□□□□□ -1.6
Hoxc5P32043 Gm11533-201ENSMUST00000120287 477 ntBASIC5.05□□□□□ -1.6
Hoxc5P32043 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC5.05□□□□□ -1.6
Hoxc5P32043 Gm24435-201ENSMUST00000157886 110 ntBASIC5.05□□□□□ -1.6
Hoxc5P32043 Gm23662-201ENSMUST00000158046 111 ntBASIC5.05□□□□□ -1.6
Hoxc5P32043 Gm10177-201ENSMUST00000160052 444 ntBASIC5.05□□□□□ -1.6
Hoxc5P32043 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Hoxc5P32043 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Hoxc5P32043 Gm2539-203ENSMUST00000181352 746 ntBASIC5.05□□□□□ -1.6
Hoxc5P32043 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Hoxc5P32043 Mir7082-201ENSMUST00000183526 92 ntBASIC5.05□□□□□ -1.6
Hoxc5P32043 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC5.05□□□□□ -1.6
Hoxc5P32043 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Hoxc5P32043 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Hoxc5P32043 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC5.05□□□□□ -1.6
Hoxc5P32043 Gm42452-201ENSMUST00000199749 617 ntBASIC5.05□□□□□ -1.6
Hoxc5P32043 Gm4874-201ENSMUST00000203589 691 ntBASIC5.05□□□□□ -1.6
Hoxc5P32043 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC5.05□□□□□ -1.6
Hoxc5P32043 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC5.05□□□□□ -1.6
Hoxc5P32043 Gm10709-201ENSMUST00000213318 480 ntBASIC5.05□□□□□ -1.6
Hoxc5P32043 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC5.05□□□□□ -1.6
Hoxc5P32043 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC5.05□□□□□ -1.6
Hoxc5P32043 AC156832.1-201ENSMUST00000217609 811 ntTSL 5 BASIC5.05□□□□□ -1.6
Hoxc5P32043 AC073562.1-201ENSMUST00000222117 401 ntBASIC5.05□□□□□ -1.6
Hoxc5P32043 AC154556.1-201ENSMUST00000224587 885 ntBASIC5.05□□□□□ -1.6
Hoxc5P32043 AC102139.1-201ENSMUST00000227000 251 ntBASIC5.05□□□□□ -1.6
Hoxc5P32043 Gm22807-201ENSMUST00000082737 129 ntBASIC5.05□□□□□ -1.6
Hoxc5P32043 Gm6645-201ENSMUST00000118505 2726 ntBASIC5.05□□□□□ -1.6
Hoxc5P32043 Gm18359-201ENSMUST00000173024 1459 ntBASIC5.05□□□□□ -1.6
Hoxc5P32043 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Hoxc5P32043 Gm37140-201ENSMUST00000192914 1684 ntBASIC5.05□□□□□ -1.6
Hoxc5P32043 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Hoxc5P32043 Gm44751-201ENSMUST00000208302 4387 ntBASIC5.04□□□□□ -1.6
Hoxc5P32043 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Hoxc5P32043 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Hoxc5P32043 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Hoxc5P32043 Ttc37-205ENSMUST00000224386 6976 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Hoxc5P32043 Nlrp4a-201ENSMUST00000068767 4259 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Hoxc5P32043 Gm37606-201ENSMUST00000191816 3116 ntBASIC5.04□□□□□ -1.6
Hoxc5P32043 Gm45819-201ENSMUST00000210940 1751 ntBASIC5.04□□□□□ -1.6
Hoxc5P32043 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Hoxc5P32043 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Hoxc5P32043 Gm4989-201ENSMUST00000118711 749 ntBASIC5.04□□□□□ -1.6
Hoxc5P32043 Gm14874-201ENSMUST00000118995 438 ntBASIC5.04□□□□□ -1.6
Hoxc5P32043 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC5.04□□□□□ -1.6
Hoxc5P32043 Gm15044-201ENSMUST00000120703 598 ntBASIC5.04□□□□□ -1.6
Hoxc5P32043 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Hoxc5P32043 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Hoxc5P32043 Gm24687-201ENSMUST00000157758 241 ntBASIC5.04□□□□□ -1.6
Hoxc5P32043 Mir6989-201ENSMUST00000184812 65 ntBASIC5.04□□□□□ -1.6
Hoxc5P32043 1700064J06Rik-201ENSMUST00000187551 386 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Hoxc5P32043 Gm29474-201ENSMUST00000187688 379 ntBASIC5.04□□□□□ -1.6
Hoxc5P32043 Gm28238-201ENSMUST00000188102 383 ntTSL 5 BASIC5.04□□□□□ -1.6
Hoxc5P32043 Gm37503-201ENSMUST00000192088 319 ntBASIC5.04□□□□□ -1.6
Hoxc5P32043 Gm37700-201ENSMUST00000192617 965 ntBASIC5.04□□□□□ -1.6
Hoxc5P32043 Ighv1-14-201ENSMUST00000194015 402 ntBASIC5.04□□□□□ -1.6
Hoxc5P32043 Mir6516-201ENSMUST00000196236 110 ntBASIC5.04□□□□□ -1.6
Hoxc5P32043 Gimd1-202ENSMUST00000196701 654 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Hoxc5P32043 Gm6520-201ENSMUST00000200636 410 ntBASIC5.04□□□□□ -1.6
Hoxc5P32043 Gm33242-201ENSMUST00000212130 1057 ntBASIC5.04□□□□□ -1.6
Hoxc5P32043 AC183268.2-201ENSMUST00000214513 446 ntBASIC5.04□□□□□ -1.6
Hoxc5P32043 Gm46223-201ENSMUST00000215196 675 ntBASIC5.04□□□□□ -1.6
Hoxc5P32043 Gm19174-201ENSMUST00000216944 956 ntBASIC5.04□□□□□ -1.6
Hoxc5P32043 Gm19168-201ENSMUST00000218804 1091 ntBASIC5.04□□□□□ -1.6
Hoxc5P32043 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC5.04□□□□□ -1.6
Hoxc5P32043 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Hoxc5P32043 AC165347.1-201ENSMUST00000224089 1025 ntBASIC5.04□□□□□ -1.6
Hoxc5P32043 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Hoxc5P32043 Gm38189-201ENSMUST00000194495 1457 ntBASIC5.04□□□□□ -1.6
Hoxc5P32043 Lipm-201ENSMUST00000025685 2701 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Hoxc5P32043 Gm37930-201ENSMUST00000194308 1886 ntBASIC5.04□□□□□ -1.6
Hoxc5P32043 AC158982.1-205ENSMUST00000227339 1876 ntBASIC5.04□□□□□ -1.6
Hoxc5P32043 Clec4a2-202ENSMUST00000041779 2481 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
Hoxc5P32043 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Hoxc5P32043 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Hoxc5P32043 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Hoxc5P32043 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Hoxc5P32043 Gm19125-201ENSMUST00000188408 1383 ntBASIC5.04□□□□□ -1.6
Hoxc5P32043 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC5.04□□□□□ -1.6
Hoxc5P32043 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC5.03□□□□□ -1.6
Hoxc5P32043 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Hoxc5P32043 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Hoxc5P32043 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Hoxc5P32043 Gm44235-201ENSMUST00000204312 3058 ntBASIC5.03□□□□□ -1.6
Hoxc5P32043 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC5.03□□□□□ -1.6
Hoxc5P32043 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Hoxc5P32043 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 90.7 ms