Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC4.69□□□□□ -1.66
Cdx1P18111 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cdx1P18111 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC4.69□□□□□ -1.66
Cdx1P18111 Gm25246-201ENSMUST00000175476 69 ntBASIC4.69□□□□□ -1.66
Cdx1P18111 Gm6223-201ENSMUST00000178436 871 ntBASIC4.69□□□□□ -1.66
Cdx1P18111 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Cdx1P18111 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cdx1P18111 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Cdx1P18111 1110008L16Rik-203ENSMUST00000183654 943 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Cdx1P18111 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Cdx1P18111 Gm8480-201ENSMUST00000190350 698 ntBASIC4.69□□□□□ -1.66
Cdx1P18111 Gm18865-201ENSMUST00000193011 1171 ntBASIC4.69□□□□□ -1.66
Cdx1P18111 Gm43354-201ENSMUST00000196862 346 ntBASIC4.69□□□□□ -1.66
Cdx1P18111 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC4.69□□□□□ -1.66
Cdx1P18111 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC4.69□□□□□ -1.66
Cdx1P18111 Gm44075-201ENSMUST00000204208 216 ntBASIC4.69□□□□□ -1.66
Cdx1P18111 Mageb16-ps2-201ENSMUST00000204513 1093 ntBASIC4.69□□□□□ -1.66
Cdx1P18111 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC4.69□□□□□ -1.66
Cdx1P18111 Gm18805-201ENSMUST00000206872 655 ntBASIC4.69□□□□□ -1.66
Cdx1P18111 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC4.69□□□□□ -1.66
Cdx1P18111 Gm7499-201ENSMUST00000210423 813 ntBASIC4.69□□□□□ -1.66
Cdx1P18111 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC4.69□□□□□ -1.66
Cdx1P18111 Gm45734-201ENSMUST00000211916 411 ntBASIC4.69□□□□□ -1.66
Cdx1P18111 Gm19212-201ENSMUST00000216642 862 ntBASIC4.69□□□□□ -1.66
Cdx1P18111 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC4.69□□□□□ -1.66
Cdx1P18111 AV026068-216ENSMUST00000223874 328 ntBASIC4.69□□□□□ -1.66
Cdx1P18111 AC154431.2-201ENSMUST00000225215 1055 ntBASIC4.69□□□□□ -1.66
Cdx1P18111 AC137117.1-201ENSMUST00000226912 441 ntBASIC4.69□□□□□ -1.66
Cdx1P18111 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cdx1P18111 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Cdx1P18111 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Cdx1P18111 Gm22126-201ENSMUST00000083244 142 ntBASIC4.69□□□□□ -1.66
Cdx1P18111 Ssxb3-201ENSMUST00000089374 824 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cdx1P18111 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Cdx1P18111 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC4.69□□□□□ -1.66
Cdx1P18111 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Cdx1P18111 Ugt2b35-201ENSMUST00000031186 3359 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Cdx1P18111 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
Cdx1P18111 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
Cdx1P18111 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC4.69□□□□□ -1.66
Cdx1P18111 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Cdx1P18111 AC151904.4-201ENSMUST00000219868 1319 ntBASIC4.69□□□□□ -1.66
Cdx1P18111 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Cdx1P18111 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cdx1P18111 Vmn1r71-201ENSMUST00000079113 4996 ntAPPRIS P2 BASIC4.68□□□□□ -1.66
Cdx1P18111 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Cdx1P18111 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Cdx1P18111 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Cdx1P18111 Gm45322-201ENSMUST00000211642 1361 ntBASIC4.68□□□□□ -1.66
Cdx1P18111 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Cdx1P18111 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Cdx1P18111 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Cdx1P18111 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Cdx1P18111 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Cdx1P18111 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Cdx1P18111 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
Cdx1P18111 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Cdx1P18111 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Cdx1P18111 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Cdx1P18111 Gm15621-201ENSMUST00000119162 364 ntBASIC4.68□□□□□ -1.66
Cdx1P18111 Olfr1298-201ENSMUST00000119566 939 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Cdx1P18111 Gm15967-201ENSMUST00000120027 1116 ntBASIC4.68□□□□□ -1.66
Cdx1P18111 Gm11369-201ENSMUST00000120812 318 ntBASIC4.68□□□□□ -1.66
Cdx1P18111 Gm13578-201ENSMUST00000120849 590 ntBASIC4.68□□□□□ -1.66
Cdx1P18111 Gm25669-201ENSMUST00000157699 112 ntBASIC4.68□□□□□ -1.66
Cdx1P18111 Gm25487-201ENSMUST00000158725 125 ntBASIC4.68□□□□□ -1.66
Cdx1P18111 Esp1-201ENSMUST00000161110 1049 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Cdx1P18111 Gm3076-201ENSMUST00000161613 451 ntBASIC4.68□□□□□ -1.66
Cdx1P18111 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC4.68□□□□□ -1.66
Cdx1P18111 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC4.68□□□□□ -1.66
Cdx1P18111 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC4.68□□□□□ -1.66
Cdx1P18111 Gm21560-202ENSMUST00000177670 618 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Cdx1P18111 Gm16434-202ENSMUST00000177712 618 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Cdx1P18111 Gm3099-202ENSMUST00000178274 618 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Cdx1P18111 Gm6676-202ENSMUST00000178376 618 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Cdx1P18111 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC4.68□□□□□ -1.66
Cdx1P18111 Gm3642-202ENSMUST00000179296 618 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
Cdx1P18111 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Cdx1P18111 Gm27266-201ENSMUST00000184521 123 ntBASIC4.68□□□□□ -1.66
Cdx1P18111 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC4.68□□□□□ -1.66
Cdx1P18111 Gm29475-201ENSMUST00000190767 312 ntBASIC4.68□□□□□ -1.66
Cdx1P18111 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Cdx1P18111 Gm32950-201ENSMUST00000193336 232 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Cdx1P18111 Gm37380-201ENSMUST00000193752 397 ntBASIC4.68□□□□□ -1.66
Cdx1P18111 Gm37719-201ENSMUST00000194615 292 ntBASIC4.68□□□□□ -1.66
Cdx1P18111 Ass-ps1-201ENSMUST00000197717 761 ntBASIC4.68□□□□□ -1.66
Cdx1P18111 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC4.68□□□□□ -1.66
Cdx1P18111 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC4.68□□□□□ -1.66
Cdx1P18111 AC165292.1-201ENSMUST00000215218 620 ntBASIC4.68□□□□□ -1.66
Cdx1P18111 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
Cdx1P18111 Gm3266-201ENSMUST00000217832 591 ntBASIC4.68□□□□□ -1.66
Cdx1P18111 CT030030.1-201ENSMUST00000218809 152 ntBASIC4.68□□□□□ -1.66
Cdx1P18111 AC154851.1-201ENSMUST00000221591 655 ntBASIC4.68□□□□□ -1.66
Cdx1P18111 AC122034.1-201ENSMUST00000227641 595 ntBASIC4.68□□□□□ -1.66
Cdx1P18111 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
Cdx1P18111 Olfr18-201ENSMUST00000086473 1156 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Cdx1P18111 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Cdx1P18111 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Cdx1P18111 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
Cdx1P18111 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms