Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC4.45□□□□□ -1.7
Hmgb3O54879 Gm10688-201ENSMUST00000214985 520 ntBASIC4.45□□□□□ -1.7
Hmgb3O54879 Gm9088-201ENSMUST00000220237 508 ntBASIC4.45□□□□□ -1.7
Hmgb3O54879 CT025611.1-201ENSMUST00000222537 906 ntTSL 5 BASIC4.45□□□□□ -1.7
Hmgb3O54879 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Hmgb3O54879 AC167013.4-201ENSMUST00000226712 317 ntBASIC4.45□□□□□ -1.7
Hmgb3O54879 AC105324.1-201ENSMUST00000227844 386 ntBASIC4.45□□□□□ -1.7
Hmgb3O54879 AC137950.3-201ENSMUST00000228250 246 ntBASIC4.45□□□□□ -1.7
Hmgb3O54879 Gm5612-201ENSMUST00000053326 375 ntBASIC4.45□□□□□ -1.7
Hmgb3O54879 n-R5s69-201ENSMUST00000083872 119 ntBASIC4.45□□□□□ -1.7
Hmgb3O54879 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Hmgb3O54879 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Hmgb3O54879 Gm9700-201ENSMUST00000193786 1617 ntBASIC4.45□□□□□ -1.7
Hmgb3O54879 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC4.45□□□□□ -1.7
Hmgb3O54879 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Hmgb3O54879 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Hmgb3O54879 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Hmgb3O54879 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.44□□□□□ -1.7
Hmgb3O54879 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Hmgb3O54879 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Hmgb3O54879 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC4.44□□□□□ -1.7
Hmgb3O54879 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Hmgb3O54879 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Hmgb3O54879 Gm37930-201ENSMUST00000194308 1886 ntBASIC4.44□□□□□ -1.7
Hmgb3O54879 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC4.44□□□□□ -1.7
Hmgb3O54879 Gm25877-201ENSMUST00000104326 129 ntBASIC4.44□□□□□ -1.7
Hmgb3O54879 Gm25344-201ENSMUST00000104503 132 ntBASIC4.44□□□□□ -1.7
Hmgb3O54879 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Hmgb3O54879 B4galt4-203ENSMUST00000114710 837 ntTSL 3 BASIC4.44□□□□□ -1.7
Hmgb3O54879 Gm14116-201ENSMUST00000117733 805 ntBASIC4.44□□□□□ -1.7
Hmgb3O54879 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC4.44□□□□□ -1.7
Hmgb3O54879 Gm11826-201ENSMUST00000118781 438 ntBASIC4.44□□□□□ -1.7
Hmgb3O54879 Cabyr-203ENSMUST00000119108 818 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Hmgb3O54879 Gm11484-201ENSMUST00000119808 338 ntBASIC4.44□□□□□ -1.7
Hmgb3O54879 Gm12804-201ENSMUST00000121030 999 ntBASIC4.44□□□□□ -1.7
Hmgb3O54879 Gm7309-201ENSMUST00000121670 581 ntBASIC4.44□□□□□ -1.7
Hmgb3O54879 Gm13077-201ENSMUST00000121941 484 ntBASIC4.44□□□□□ -1.7
Hmgb3O54879 Gm15164-201ENSMUST00000122203 271 ntBASIC4.44□□□□□ -1.7
Hmgb3O54879 Gm26353-201ENSMUST00000158224 255 ntBASIC4.44□□□□□ -1.7
Hmgb3O54879 Gm23115-201ENSMUST00000158480 108 ntBASIC4.44□□□□□ -1.7
Hmgb3O54879 Gm17024-201ENSMUST00000165676 634 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Hmgb3O54879 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Hmgb3O54879 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Hmgb3O54879 Gm10410-201ENSMUST00000180138 384 ntBASIC4.44□□□□□ -1.7
Hmgb3O54879 Gm26898-201ENSMUST00000181678 384 ntBASIC4.44□□□□□ -1.7
Hmgb3O54879 Gm27185-201ENSMUST00000184296 247 ntBASIC4.44□□□□□ -1.7
Hmgb3O54879 Gm27617-201ENSMUST00000184321 168 ntBASIC4.44□□□□□ -1.7
Hmgb3O54879 Stpg4-203ENSMUST00000187078 668 ntAPPRIS ALT2 TSL 3 BASIC4.44□□□□□ -1.7
Hmgb3O54879 Gm29664-201ENSMUST00000191125 463 ntBASIC4.44□□□□□ -1.7
Hmgb3O54879 Gm18698-201ENSMUST00000192327 668 ntBASIC4.44□□□□□ -1.7
Hmgb3O54879 Gm37073-201ENSMUST00000192469 1222 ntBASIC4.44□□□□□ -1.7
Hmgb3O54879 Gm8826-201ENSMUST00000193161 948 ntBASIC4.44□□□□□ -1.7
Hmgb3O54879 Gm38170-201ENSMUST00000195404 816 ntBASIC4.44□□□□□ -1.7
Hmgb3O54879 Gm9317-201ENSMUST00000197055 862 ntBASIC4.44□□□□□ -1.7
Hmgb3O54879 Gm43629-201ENSMUST00000201782 704 ntBASIC4.44□□□□□ -1.7
Hmgb3O54879 Gm44366-201ENSMUST00000204933 674 ntTSL 3 BASIC4.44□□□□□ -1.7
Hmgb3O54879 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC4.44□□□□□ -1.7
Hmgb3O54879 Gm18226-201ENSMUST00000215261 521 ntBASIC4.44□□□□□ -1.7
Hmgb3O54879 AC124826.1-201ENSMUST00000221651 325 ntBASIC4.44□□□□□ -1.7
Hmgb3O54879 Gm8288-201ENSMUST00000223406 593 ntBASIC4.44□□□□□ -1.7
Hmgb3O54879 CT010453.2-201ENSMUST00000227005 483 ntBASIC4.44□□□□□ -1.7
Hmgb3O54879 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Hmgb3O54879 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Hmgb3O54879 Snord59a-201ENSMUST00000082844 74 ntBASIC4.44□□□□□ -1.7
Hmgb3O54879 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Hmgb3O54879 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Hmgb3O54879 Olfr618-201ENSMUST00000098197 957 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Hmgb3O54879 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Hmgb3O54879 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Hmgb3O54879 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Hmgb3O54879 Abcc2-202ENSMUST00000099413 1926 ntBASIC4.44□□□□□ -1.7
Hmgb3O54879 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
Hmgb3O54879 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Hmgb3O54879 Olfr979-202ENSMUST00000215523 3397 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Hmgb3O54879 Gm43258-201ENSMUST00000200312 1950 ntBASIC4.44□□□□□ -1.7
Hmgb3O54879 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Hmgb3O54879 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC4.43□□□□□ -1.7
Hmgb3O54879 CT573016.1-201ENSMUST00000224814 2103 ntAPPRIS P5 BASIC4.43□□□□□ -1.7
Hmgb3O54879 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Hmgb3O54879 March1-203ENSMUST00000098708 4000 ntAPPRIS P3 TSL 5 BASIC4.43□□□□□ -1.7
Hmgb3O54879 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
Hmgb3O54879 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Hmgb3O54879 Gm37776-201ENSMUST00000193471 2497 ntBASIC4.43□□□□□ -1.7
Hmgb3O54879 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Hmgb3O54879 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
Hmgb3O54879 Gm12245-201ENSMUST00000117266 357 ntBASIC4.43□□□□□ -1.7
Hmgb3O54879 Gm13702-201ENSMUST00000118542 825 ntBASIC4.43□□□□□ -1.7
Hmgb3O54879 Gm14985-201ENSMUST00000118693 786 ntBASIC4.43□□□□□ -1.7
Hmgb3O54879 Gm8317-201ENSMUST00000121261 471 ntBASIC4.43□□□□□ -1.7
Hmgb3O54879 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Hmgb3O54879 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC4.43□□□□□ -1.7
Hmgb3O54879 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Hmgb3O54879 Gm23964-201ENSMUST00000157966 107 ntBASIC4.43□□□□□ -1.7
Hmgb3O54879 Gm24741-201ENSMUST00000158857 106 ntBASIC4.43□□□□□ -1.7
Hmgb3O54879 Cabcoco1-202ENSMUST00000166919 1016 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
Hmgb3O54879 Cfhr3-201ENSMUST00000170441 1022 ntBASIC4.43□□□□□ -1.7
Hmgb3O54879 Gm37177-201ENSMUST00000193768 417 ntBASIC4.43□□□□□ -1.7
Hmgb3O54879 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC4.43□□□□□ -1.7
Hmgb3O54879 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Hmgb3O54879 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC4.43□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms