Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Gm25404-201ENSMUST00000082970 107 ntBASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Oat-rs1-201ENSMUST00000122186 1311 ntBASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 AC134917.1-201ENSMUST00000220517 1449 ntBASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Obox2-201ENSMUST00000036575 1459 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Gm42520-201ENSMUST00000199642 1502 ntBASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 AC113031.7-201ENSMUST00000228609 1928 ntBASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Gm44068-201ENSMUST00000204049 2128 ntBASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Adam21-201ENSMUST00000008582 2911 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Nsd1-207ENSMUST00000224973 9905 ntBASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
Pcdh1F7BJK1 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Pard3-212ENSMUST00000160717 4214 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Gm38090-201ENSMUST00000195733 1942 ntBASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Gm29761-201ENSMUST00000215964 1939 ntBASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Olfr945-202ENSMUST00000216698 1864 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Ttc33-201ENSMUST00000022751 1832 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Gm37703-201ENSMUST00000192292 1784 ntBASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Vmn1r37-204ENSMUST00000226974 1770 ntAPPRIS P2 BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Ppp1r3b-201ENSMUST00000070481 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Mir190b-201ENSMUST00000104803 80 ntBASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Gm22032-201ENSMUST00000116946 116 ntBASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Gm12433-201ENSMUST00000119659 255 ntBASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Gm15157-201ENSMUST00000121852 702 ntBASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 AC122263.2-201ENSMUST00000145909 586 ntTSL 3 BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Gm22915-201ENSMUST00000157615 136 ntBASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Gm18354-201ENSMUST00000173515 1068 ntBASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Gm25037-201ENSMUST00000175418 110 ntBASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Mir6348-201ENSMUST00000183804 120 ntBASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Gm29413-201ENSMUST00000186019 880 ntBASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Gm28661-201ENSMUST00000188231 681 ntBASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Gm20871-201ENSMUST00000191322 931 ntBASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Gm37946-201ENSMUST00000192064 347 ntBASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Gm17895-201ENSMUST00000194028 874 ntBASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Gm34015-201ENSMUST00000194908 451 ntBASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Gm42622-201ENSMUST00000197229 355 ntBASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Gm43098-201ENSMUST00000199989 1297 ntBASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Gm44449-201ENSMUST00000203610 153 ntBASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Gm8999-201ENSMUST00000204951 969 ntBASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 1190001M18Rik-201ENSMUST00000215937 1270 ntBASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Gm5831-201ENSMUST00000216016 1209 ntBASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Olfr790-204ENSMUST00000218901 1070 ntBASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 AC091237.1-201ENSMUST00000224911 637 ntBASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Fpr2-201ENSMUST00000064068 1133 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Mir129-2-201ENSMUST00000083577 90 ntBASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Mir296-201ENSMUST00000083587 79 ntBASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Gm25189-201ENSMUST00000083911 164 ntBASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Olfr1271-201ENSMUST00000099751 918 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Gm20300-201ENSMUST00000214634 3440 ntBASIC5.86□□□□□ -1.47
Pcdh1F7BJK1 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms