Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gm25843-201ENSMUST00000122582 314 ntBASIC5.7□□□□□ -1.5
Srp54bE9PXC0 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC5.7□□□□□ -1.5
Srp54bE9PXC0 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC5.7□□□□□ -1.5
Srp54bE9PXC0 Mir1970-201ENSMUST00000157839 104 ntBASIC5.7□□□□□ -1.5
Srp54bE9PXC0 Gm23162-201ENSMUST00000175081 121 ntBASIC5.7□□□□□ -1.5
Srp54bE9PXC0 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Srp54bE9PXC0 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC5.7□□□□□ -1.5
Srp54bE9PXC0 Gm42952-201ENSMUST00000196393 731 ntTSL 2 BASIC5.7□□□□□ -1.5
Srp54bE9PXC0 Gm38413-201ENSMUST00000197852 348 ntTSL 2 BASIC5.7□□□□□ -1.5
Srp54bE9PXC0 Gm36378-201ENSMUST00000201709 388 ntBASIC5.7□□□□□ -1.5
Srp54bE9PXC0 Gm7832-201ENSMUST00000202613 880 ntBASIC5.7□□□□□ -1.5
Srp54bE9PXC0 Gm45169-201ENSMUST00000205717 639 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Srp54bE9PXC0 Gm6070-201ENSMUST00000207275 419 ntBASIC5.7□□□□□ -1.5
Srp54bE9PXC0 AC105169.1-201ENSMUST00000218912 1294 ntBASIC5.7□□□□□ -1.5
Srp54bE9PXC0 AC110381.1-201ENSMUST00000218987 586 ntBASIC5.7□□□□□ -1.5
Srp54bE9PXC0 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC5.7□□□□□ -1.5
Srp54bE9PXC0 AC154417.1-201ENSMUST00000223876 476 ntBASIC5.7□□□□□ -1.5
Srp54bE9PXC0 CT025552.1-201ENSMUST00000224561 521 ntBASIC5.7□□□□□ -1.5
Srp54bE9PXC0 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Srp54bE9PXC0 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Srp54bE9PXC0 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Srp54bE9PXC0 AC144733.2-201ENSMUST00000222552 2292 ntBASIC5.7□□□□□ -1.5
Srp54bE9PXC0 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Srp54bE9PXC0 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Srp54bE9PXC0 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Srp54bE9PXC0 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC5.7□□□□□ -1.5
Srp54bE9PXC0 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Srp54bE9PXC0 AC122769.3-201ENSMUST00000227739 3245 ntBASIC5.7□□□□□ -1.5
Srp54bE9PXC0 Txndc9-201ENSMUST00000162031 3381 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Srp54bE9PXC0 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Srp54bE9PXC0 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Srp54bE9PXC0 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
Srp54bE9PXC0 Pign-206ENSMUST00000187537 4006 ntTSL 5 BASIC5.7□□□□□ -1.5
Srp54bE9PXC0 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Ascc3-206ENSMUST00000219226 1357 ntTSL 5 BASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Prom1-206ENSMUST00000171543 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
Srp54bE9PXC0 A330015K06Rik-202ENSMUST00000195685 2196 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Srp54bE9PXC0 AC163731.1-201ENSMUST00000225696 3118 ntBASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Gm37060-201ENSMUST00000194997 2397 ntBASIC5.69□□□□□ -1.5
Srp54bE9PXC0 AC153962.3-202ENSMUST00000217778 1412 ntTSL 5 BASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Hikeshi-203ENSMUST00000117354 297 ntTSL 2 BASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Gm11617-201ENSMUST00000119609 639 ntBASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Gm15044-201ENSMUST00000120703 598 ntBASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Ftx-201ENSMUST00000123841 673 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Gm15848-203ENSMUST00000136015 482 ntTSL 5 BASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Gm24692-201ENSMUST00000157761 146 ntBASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Gm26489-201ENSMUST00000157880 264 ntBASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Gm22361-201ENSMUST00000158435 176 ntBASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC5.69□□□□□ -1.5
Srp54bE9PXC0 1110046J04Rik-203ENSMUST00000181800 777 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Srp54bE9PXC0 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Gm29678-201ENSMUST00000193966 1134 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Gm2429-201ENSMUST00000194635 586 ntBASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Gm42646-201ENSMUST00000202233 914 ntBASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Gm8039-201ENSMUST00000204758 712 ntBASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC5.69□□□□□ -1.5
Srp54bE9PXC0 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC5.69□□□□□ -1.5
Srp54bE9PXC0 AC164164.2-201ENSMUST00000221809 785 ntBASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Gm16497-202ENSMUST00000223480 557 ntTSL 3 BASIC5.69□□□□□ -1.5
Srp54bE9PXC0 AC080021.1-201ENSMUST00000228104 700 ntBASIC5.69□□□□□ -1.5
Srp54bE9PXC0 AC118250.1-201ENSMUST00000228569 875 ntBASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Mir365-2-201ENSMUST00000083555 112 ntBASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Gm25099-201ENSMUST00000093716 116 ntBASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Fpr-rs6-201ENSMUST00000095636 1020 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Hlcs-209ENSMUST00000228910 4150 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Gm44735-201ENSMUST00000206197 1752 ntBASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Zbed6-201ENSMUST00000190574 5007 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Srp54bE9PXC0 Gm42781-201ENSMUST00000201317 2719 ntBASIC5.68□□□□□ -1.5
Srp54bE9PXC0 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Srp54bE9PXC0 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
Srp54bE9PXC0 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Srp54bE9PXC0 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.68□□□□□ -1.5
Srp54bE9PXC0 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Srp54bE9PXC0 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Srp54bE9PXC0 Olfr1330-203ENSMUST00000106361 1419 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Srp54bE9PXC0 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Srp54bE9PXC0 Tmprss11b-201ENSMUST00000038448 4171 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Srp54bE9PXC0 4930550C14Rik-203ENSMUST00000215668 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Srp54bE9PXC0 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Srp54bE9PXC0 Rpl7a-ps9-201ENSMUST00000117118 777 ntBASIC5.68□□□□□ -1.5
Srp54bE9PXC0 Gm11908-201ENSMUST00000117755 347 ntBASIC5.68□□□□□ -1.5
Srp54bE9PXC0 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms