Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm5558-201ENSMUST00000178933 495 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm25208-201ENSMUST00000178964 121 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm24766-201ENSMUST00000179182 121 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm24567-201ENSMUST00000179294 121 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm25228-201ENSMUST00000180121 121 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm23304-201ENSMUST00000180209 121 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Blm-202ENSMUST00000170315 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm44043-201ENSMUST00000203426 3253 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm42551-201ENSMUST00000197701 1573 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 AC159195.2-201ENSMUST00000223670 3757 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 B230354K17Rik-201ENSMUST00000181149 4897 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Zim3-202ENSMUST00000203365 3226 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm42998-201ENSMUST00000197053 2371 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm21781-201ENSMUST00000178920 4838 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Mapk9-203ENSMUST00000102778 4447 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm23883-201ENSMUST00000122686 290 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm22650-201ENSMUST00000175138 105 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm7721-201ENSMUST00000200446 546 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 AC120011.1-201ENSMUST00000202147 744 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm9278-201ENSMUST00000205508 553 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Olfr1473-ps1-201ENSMUST00000207135 958 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Slc17a6-201ENSMUST00000032710 4137 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm37106-201ENSMUST00000193760 1532 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm26873-201ENSMUST00000181390 2368 ntTSL 5 BASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Abca4-201ENSMUST00000013995 7263 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Ank1-213ENSMUST00000141784 6566 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Cfap221-201ENSMUST00000037840 2511 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 AC154841.1-201ENSMUST00000227263 1479 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Smim15-201ENSMUST00000095458 1918 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm15752-201ENSMUST00000117427 394 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm23872-201ENSMUST00000175432 77 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Mir7050-201ENSMUST00000184636 60 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Scgb2b6-201ENSMUST00000188132 330 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm37961-201ENSMUST00000192729 299 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm43232-201ENSMUST00000201346 364 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 AC187103.4-202ENSMUST00000225091 230 ntBASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Taf1-202ENSMUST00000118878 7210 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
Col6a3E9PWQ3 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a3E9PWQ3 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a3E9PWQ3 Gm43336-201ENSMUST00000200487 4504 ntBASIC5.3□□□□□ -1.56
Col6a3E9PWQ3 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a3E9PWQ3 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a3E9PWQ3 Gm38011-201ENSMUST00000193312 279 ntBASIC5.3□□□□□ -1.56
Col6a3E9PWQ3 Gm43057-201ENSMUST00000196789 429 ntTSL 5 BASIC5.3□□□□□ -1.56
Col6a3E9PWQ3 Gm43814-201ENSMUST00000197851 413 ntBASIC5.3□□□□□ -1.56
Col6a3E9PWQ3 9330118I20Rik-201ENSMUST00000203390 1066 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a3E9PWQ3 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC5.3□□□□□ -1.56
Col6a3E9PWQ3 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Col6a3E9PWQ3 Hist1h1d-201ENSMUST00000045301 7425 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Col6a3E9PWQ3 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a3E9PWQ3 Zfp661-202ENSMUST00000110366 4912 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a3E9PWQ3 Ugt2b38-201ENSMUST00000072818 1891 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a3E9PWQ3 AC160028.2-201ENSMUST00000218937 2519 ntBASIC5.3□□□□□ -1.56
Col6a3E9PWQ3 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a3E9PWQ3 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Col6a3E9PWQ3 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC5.3□□□□□ -1.56
Col6a3E9PWQ3 Cacna1f-202ENSMUST00000115726 6079 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a3E9PWQ3 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a3E9PWQ3 Gm14610-201ENSMUST00000118358 966 ntBASIC5.3□□□□□ -1.56
Col6a3E9PWQ3 Gm14874-201ENSMUST00000118995 438 ntBASIC5.3□□□□□ -1.56
Col6a3E9PWQ3 Gm22326-201ENSMUST00000158897 351 ntBASIC5.3□□□□□ -1.56
Col6a3E9PWQ3 Reg3d-202ENSMUST00000167492 644 ntTSL 5 BASIC5.3□□□□□ -1.56
Col6a3E9PWQ3 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC5.3□□□□□ -1.56
Col6a3E9PWQ3 Reg3d-203ENSMUST00000205240 544 ntTSL 2 BASIC5.3□□□□□ -1.56
Col6a3E9PWQ3 Reg3d-201ENSMUST00000089667 782 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a3E9PWQ3 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
Col6a3E9PWQ3 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Col6a3E9PWQ3 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
Col6a3E9PWQ3 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a3E9PWQ3 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Col6a3E9PWQ3 Gm19807-201ENSMUST00000173971 667 ntBASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 Gm18553-201ENSMUST00000194152 634 ntBASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 Gm44824-201ENSMUST00000207021 229 ntBASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 Gm30034-201ENSMUST00000219589 248 ntTSL 5 BASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 AL590503.1-201ENSMUST00000222053 321 ntBASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC5.29□□□□□ -1.56
Col6a3E9PWQ3 Pik3r4-201ENSMUST00000065778 4711 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms